Table 1.
Predicted miR-200b, miR-200a, or miR-429 sites in transcripts differentially expressed in mammary glands from MTB-IGFIR vs Control and MTB-IGFIR vs MTB-IGFIRba429 mice.
| MTB-IGFIR vs Control |
MTB-IGFIR vs MTB-IGFIRba429 |
Predicted target of miR-200b/200a/429 |
|||||
|---|---|---|---|---|---|---|---|
| Transcript | LogFC | FDR | LogFC | FDR | TargetScan | miRDB | miRWalk |
| Saa2 | 3.9 | 9.2E-13 | 3.2 | 1.2E-21 | No | No | miR-200b, miR-200a |
| Saa1 | 3.6 | 1.4E-11 | 2.7 | 4.6E-10 | No | No | miR-200b |
| Slc26a9 | 3.1 | 9.4E-09 | 2.0 | 9.3E-03 | No | No | miR-200b, miR-200a, miR-429 |
| Gm42793 | 4.6 | 2.1E-07 | 4.2 | 1.9E-03 | – | – | – |
| Tmprss4 | 2.2 | 2.4E-07 | 1.7 | 6.2E-04 | miR-200a | No | miR-200b, miR-200a, miR-429 |
| Kctd14 | 1.6 | 1.2E-04 | 1.6 | 8.9E-03 | No | No | miR-200b, miR-200a, miR-429 |
| Spp1 | 2.8 | 3.3E-04 | 2.4 | 3.3E-05 | miR-200a | No | miR-200b |
| Car6 | 1.8 | 4.8E-04 | 3.2 | 6.3E-06 | No | No | miR-200b, miR-429 |
| Muc4 | 2.2 | 6.9E-04 | 1.8 | 7.8E-06 | No | No | miR-200b, miR-429 |
| Slc30a2 | 2.4 | 7.4E-04 | 2.1 | 8.9E-03 | miR-429 | No | miR-200b, miR-200a, miR-429 |
| Gm47585 | 3.5 | 1.4E-03 | 4.5 | 8.5E-03 | – | – | – |
| Proser2 | 1.3 | 1.6E-03 | 1.4 | 9.2E-04 | miR-200a | miR-200a | miR-200a |
| Rem2 | 1.6 | 1.7E-03 | 2.5 | 6.3E-06 | No | No | miR-200b, miR-200a |
| 9130230L23Rik | 1.8 | 2.1E-03 | 2.0 | 6.7E-03 | – | – | – |
| Slc35d3 | 2.2 | 2.2E-03 | 3.8 | 2.7E-05 | No | No | miR-200b, miR-429 |
| Duox1 | 2.0 | 3.2E-03 | 2.5 | 1.7E-03 | No | No | miR-200b, miR-200a |
| F2rl1 | 1.1 | 3.6E-03 | 1.3 | 2.8E-03 | No | No | miR-200b, miR-200a |
| Gm10384 | 1.8 | 3.8E-03 | 2.6 | 3.4E-08 | – | – | – |