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. 1999 May;37(5):1260–1264. doi: 10.1128/jcm.37.5.1260-1264.1999

TABLE 2.

Efficacy of DNase treatment of cellular RNA extracted from cellular specimens

Step No. of HIV-1 RNA copies/PCR mixture for the following specimens with the indicated no. of DNA copiesa:
Amplicor RNA diluent
Control, 20,000 DNA copiesbc Patient Ad
Patient B, no DNAd Patient C, no DNAd
200 DNA copiese 20,000 DNA copiese 200 DNA copiesc No DNA
1. No processing 206 42,730 NDf ND ND ND ND
2. RNeasy protocol without DNase I ND ND 70,503 ND ND ND ND
3. Standard protocol with 1× DNase I ND ND 9 49 65 13 5
4. Extended protocol with 2× DNase I ND ND <2 51 66 9 6
No. of samplesg 1 1 2 2 2 1 1
a

Copies of restriction enzyme (PvuII)-digested diluted plasmid pBH10 (5); calculation included the consideration that one molecule of double-stranded DNA represents two templates for the PCR. 

b

PBMCs from an HIV-negative donor. 

c

DNA was added after step 2. 

d

PBMCs from HIV-positive donors receiving HAART. 

e

DNA was added after step 1. 

f

ND, not determined.