Fig. 3.

Visual analysis of quantitative proteomic data identifying unique and shared proteins across experimental conditions. A. Upset plot revealing the number of proteins uniquely shared between the conditions indicated on the parameter grid. The horizontal bar chart on the left represents the number of proteins present in each condition (Set Size). The parameter grid indicates which conditions share unique detected proteins as presented in the vertical bar chart. Parameter grid colours indicate intersections of proteins unique to the control (black), all experimental conditions (red), ASW-specific conditions (blues), brine-specific conditions (yellow and oranges), and unique to nutrient additions (greens). B. Venn diagram revealing the overlap and uniqueness of proteins identified across all samples.