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. 2021 Sep 27;4:1132. doi: 10.1038/s42003-021-02642-9

Table 1.

Platelet count polygenic risk score and correlation with human diseases and quantitative traits.

Trait Iceland UK Combined
E P nAff/nCon E P nAff/nCon E (95% CI) P Phet
AS 0.179 0.002 373/139,426 0.322 5.2 × 10−15 612/407,963 0.274 (0.208, 0.340) 3.2 × 10−16 0.044
Hypertension 0.021 0.017 32,026/110,632 0.020 4.4 × 10−6 77,566/331,087 0.020 (0.013, 0.028) 2.3 × 10−7 0.92
RA 0.129 4.3 × 10−7 1772/136,368 0.098 5.7 × 10−10 4001/404,652 0.107 (0.080, 0.133) 2.1 × 10−15 0.32
MPN 0.237 0.0017 180/141,889 0.209 0.00011 348/406,981 0.218 (0.132, 0.305) 6.6 × 10−7 0.76
BPH 0.018 0.2 9346/42,591 0.041 5.6 × 10−8 21,067/166,609 0.036 (0.023, 0.049) 7.0 × 10−8 0.15
Trait Beta P n Beta P n Beta (95% CI) P Phet
PLT 0.228 2.9 × 10−1558 139,489 0.326 3.8 × 10−6978 397,495 0.295 (0.292, 0.298) 3.9 × 10−8334 5.1 × 10−531
MPV −0.201 1.2 × 10−675 136,560 −0.192 1.2 × 10−1865 397,490 −0.194 (−0.198, −0.190) 2.4 × 10−2538 1.9 × 10−5
WBC 0.059 7.6 × 10−116 140,123 0.082 1.2 × 10−463 397,495 0.075 (0.072, 0.078) 2.3 × 10−566 1.0 × 10−31
Lymphocyte count 0.047 3.4 × 10−73 132,215 0.066 3.3 × 10−300 396,820 0.060 (0.057, 0.063) 1.3 × 10−363 1.6 × 10−9
Basophil count 0.027 4.2 × 10−64 131,881 0.026 3.2 × 10−60 396,820 0.026 (0.024, 0.029) 2.2 × 10−122 0.66
Eosinophil count 0.043 6.6 × 10−61 131,889 0.061 7.2 × 10−251 396,820 0.055 (0.052, 0.058) 8.7 × 10−303 1.4 × 10−8
Monocyte count 0.055 2.2 × 10−87 132,212 0.063 5.9 × 10−243 396,820 0.060 (0.057, 0.064) 4.4 × 10−327 0.00012
Neutrophil count 0.042 8.2 × 10−66 132,200 0.062 2.9 × 10−270 396,820 0.055 (0.052, 0.058) 1.4 × 10−324 3.9 × 10−25
Triglycerides 0.025 9.7 × 10−9 96,081 0.020 2.4 × 10−29 390,346 0.021 (0.017, 0.024) 2.7 × 10−36 0.29
Total cholesterol 0.023 2.2 × 10−7 102,393 0.012 2.1 × 10−9 390,652 0.014 (0.010, 0.017) 3.2 × 10−14 0.024
Non-HDL cholesterol 0.021 4.2 × 10−6 96,881 0.013 3.5 × 10−9 358,461 0.015 (0.011, 0.018) 2.5 × 10−13 0.11
Heart rate 0.022 2.1 × 10−6 55,042 0.015 1.9 × 10−17 385,917 0.016 (0.013, 0.019) 5.9 × 10−22 0.16
Mean arterial pressure 0.009 0.041 76,003 0.013 1.2 × 10−12 385,914 0.012 (0.009, 0.016) 2.0 × 10−13 0.4
GGTP 0.031 2.1 × 10−14 101,537 0.031 7.4 × 10−60 390,457 0.031 (0.028, 0.034) 1.4 × 10−72 1
AP 0.020 2.8 × 10−6 102,035 0.018 2.3 × 10−21 390,671 0.018 (0.015, 0.022) 3.9 × 10−26 0.67
Bilirubin −0.029 3.1 × 10−13 73,535 −0.013 4.5 × 10−17 389,085 −0.015 (−0.018, −0.012) 1.2 × 10−25 0.00018
CRP 0.013 5.7 × 10−5 115,557 0.019 2.2 × 10−24 389,840 0.018 (0.014, 0.021) 2.3 × 10−27 0.11
Creatinine −0.019 1.3 × 10−6 136,328 −0.014 4.8 × 10−15 390,463 −0.015 (−0.018, −0.012) 6.6 × 10−20 0.25
Height −0.055 6.6 × 10−20 74,992 −0.036 1.8 × 10−67 407,823 −0.038 (−0.042, −0.034) 1.1 × 10−83 0.0029
Weight −0.027 2.9 × 10−8 76,546 −0.020 1.9 × 10−29 407,548 −0.021 (−0.024, −0.018) 8.9 × 10−36 0.18
RBC −0.005 0.062 139,114 0.002 0.28 397,499 0.000 (−0.003, 0.003) 0.85 0.032

AP alkaline phosphatase, AS ankylosing spondylitis, BPH benign prostate hyperplasia, CRP C-reactive protein, E effect, GGTP gamma-glutamyl transpeptidase, MPN myeloproliferative neoplasm, MPV mean platelet volume, n number of individuals, nAff number of cases, nCon number of controls, P P value, Phet P value for heterogeneity in the effect estimate between the Icelandic and UK Biobank data, PLT platelet count, RA rheumatoid arthritis, RBC red blood cell count, WBC white blood cell count.

The applied significance threshold was a combined P value of 1 × 10−5 (see “Methods”). Only statistically significant associations are presented.