Table 1.
SSR primers used and their sequences
| Primer name | Forward primer sequence (5′ to 3′) | Reverse primer sequence (3′ to 5′) | Repeat motif | Estimated base pair |
|---|---|---|---|---|
| CEDG006 | AATTGCTCTCGAACCAGCTC | GGTGTACAAGTGTGTGCAAG | (AG)10AA(AG)18 | 140-162 |
| CEDG010 | TGGGCTACCAACTTTTCCTC | TGAGCGACATCTTCAACACG | (AG)21 | 180-210 |
| CEDG050 | GGCAGAATCGTACAAGTG | GTCAGATTCTCGCTTGCATG | (AG)12 | 140-160 |
| CEDG056 | GAACTTAACTTGGGTTGTCTGC | GCTATGATGGAAGAGGGCATGG | (AG)14 | 150-264 |
| CEDG088 | TCTTGTCATTTAGCACTTAGCACG | CTACCTATCTGAGGGACAC | (AG)7 | 110-140 |
| CEDG092 | TCTTTTGGTTGTAGCAGGATGAAC | TACAACTGATATGCAACGGTTAGG | (AG)17 | 140-220 |
| CEDG214 | CACTCACTGCAAAGAGCAAC | CTACCTATCTGAGGGACAC | (AG)4 AA (AG)31 | 180-205 |
| CEDG232 | GATGACCAAGGTAACGTG | GGACAGATCCAAAACGTG | (AG)16 | 205 |
| CEDG253z | CACTTCCATGATGACTCACC | CACCCTTCTTTATCCTCTTCG | (AG)30 | 253 |
| CEDG305 | GCAGCTTCACATGCATAGTAC | GAACTTAACTTGGGTTGTCTGC | (AG)22 | 106-130 |