TABLE 3.
Specificity of primer combinations for the identification of Burkholderia spp.
Primer designationa | Target organisms | Size of PCR product (bp) for:
|
||||||||
---|---|---|---|---|---|---|---|---|---|---|
B. cepacia genomovar
|
B. multivorans | B. vietnamiensis | B. gladioli | B. mallei | B. pseudomallei | R. pickettii | ||||
I | III | IV | ||||||||
Eub-16-1 + Eub-16-2 | Eubacteria | 519 | 519 | 519 | 519 | 519 | 519 | 519 | 519 | 519 |
BuRa-16-1 + BuRa-16-2 | Burkholderia and Ralstonia spp. | 409 | 409 | 409 | 409 | 409 | 409 | 409 | 409 | 409 |
Eub-16-1 + CeMuVi-16-2457 | B. cepacia, B. multivorans, and B. vietnamiensis | 463 | 463 | 463 | 463 | 463 | ||||
Eub-16-1 + Ce-16-21028 | B. cepacia | 1,015 | 1,015 | 1,015 | ||||||
Eub-16-1 + MuVi-16-21028 | B. multivorans and B. vietnamiensis | 1,015 | 1,015 | |||||||
ViMaPs-23-1 + CeVi-23-2 | B. vietnamiensis | 1,055 | ||||||||
Eub-16-1 + Gl-16-2457 | B. gladioli | 463 | ||||||||
Eub-16-1 + MaPs-16-2457 | B. mallei and B. pseudomallei | 463 | 463 | |||||||
ViMaPs-23-1 + Ma-23-2 | B. mallei | 526 | ||||||||
Eub-16-1 + Pi-16-2461 | R. pickettii | 467 |
For sequences see Table 2.