TABLE 1.
Virus | Genome region amplified | Primer coordinates | Primer orientation | Primer sequence |
---|---|---|---|---|
HSV-1 and -2 | Glycoprotein D | 716–735 | Outer sense | ATCCGAACGCAGCCCCGCTG |
1131–1112 | Outer antisense | TCCGG(G/C)GGCAGCAGGGTGCT | ||
789–808 | Inner sense | GCGCCGTCAGCGAGGATAAC | ||
1070–1051 | Inner antisense | AGCTGTATA(G/C)GGCGACGGTG | ||
VZV | Gene 29 | 51067–51087 | Outer sense | ACGGGTCTTGCCGGAGCTGGT |
51338–51315 | Outer antisense | AATGCCGTGACCACCAAGTATAAT | ||
51091–51111 | Inner sense | ACCTTAAAACTCACTACCAGT | ||
51298–51279 | Inner antisense | CTAATCCAAGGCGGGTGCAT | ||
Enteroviruses | 5′ NTRa | 454–470 | Outer sense | CGGCCCCTGAATGCGGC |
647–630 | Outer antisense | CACCGGATGGCCAATCCA | ||
457–474 | Inner sense | CCCCTGAATGCGGCTAAT | ||
603–584 | Inner antisense | ATTGTCACCATAAGCAGCCA | ||
HSV-1 | Glycoprotein D | 619–638 | Outer and inner sense | CGAAGACGTCCGGAAACAAC |
899–915 | Outer antisense | CGGTGCTCCAGGATAAA | ||
Inner antisense | TCTCCGTCCAGTCGTTTATCTTC | |||
HSV-2 | Glycoprotein D | 619–638 | Outer and inner sense | GGACGAGGCCCGAAAGCACA |
899–915 | Outer antisense | CGGTGCTCCAGGATAAA | ||
Inner antisense | TCTCCGTCCAGTCGTTTATCTTC |
5′ NTR, 5′ nontranslated region.