Table 2.
Sample ID | Clean reads | GC content (%) | Q30 percent (%) | Unique Mapped Reads | Unique mapped rate (%) | Overall align rate (%) | Exon reads rate (%) | Intron reads rate (%) | Intergenic reads rate (%) |
---|---|---|---|---|---|---|---|---|---|
N1 | 109,056,738 | 48.62 | 94.29 | 94,413,932 | 86.57 | 88.23 | 54.40 | 30.00 | 15.60 |
N2 | 109,235,784 | 48.59 | 94.34 | 94,640,180 | 86.64 | 88.06 | 52.70 | 32.10 | 15.20 |
N3 | 109,881,144 | 48.58 | 94.34 | 94,476,318 | 85.98 | 87.22 | 50.40 | 33.50 | 16.10 |
S1 | 105,487,548 | 49.83 | 94.53 | 89,605,026 | 84.94 | 86.49 | 56.90 | 28.10 | 15.00 |
S2 | 111,778,422 | 47.86 | 94.17 | 98,718,710 | 88.32 | 89.88 | 54.80 | 29.70 | 15.50 |
S3 | 107,605,900 | 47.3 | 94.33 | 96,656,783 | 89.82 | 91.45 | 56.30 | 28.40 | 15.30 |
S4 | 107,875,526 | 47.34 | 93.98 | 95,869,340 | 88.87 | 90.40 | 56.10 | 29.60 | 14.40 |
T1 | 105,705,312 | 47.79 | 94.15 | 92,352,807 | 87.37 | 89.19 | 57.70 | 26.10 | 16.20 |
T2 | 117,058,098 | 49.05 | 94.02 | 98,284,907 | 83.96 | 85.65 | 60.90 | 24.90 | 14.20 |
T3 | 120,004,466 | 47.81 | 94.31 | 102,552,464 | 85.46 | 86.69 | 54.20 | 29.80 | 15.90 |
T4 | 120,003,584 | 48.4 | 94.53 | 103,358,505 | 86.13 | 87.52 | 53.20 | 31.00 | 15.80 |