Table 2. Minority variants and rates ( > 2%) found across 16 WRCEVA isolates.

Sample	Nt	Nuc	ReadDepth	A	U	G	C	VariantRate	Location	Result
WRCEVA_000501	12,049	C	2,116	0	95	1	2020	4.5%	ORF1ab	N3928K
WRCEVA_000502	10,207	C	2,240	0	118	0	2,122	5.3%	-	-
WRCEVA_000502	16,050	U	3,853	0	3,322	0	531	13.8%	-	-
WRCEVA_000502	17,489	A	4,597	4,433	162	1	1	3.6%	ORF1ab	E5742V
WRCEVA_000502	21,526	A	8,749	6,508	0	2,240	1	25.6%	ORF1ab	I7088V
WRCEVA_000503	14,220	C	1,638	1	463	0	1,174	28.3%	-	-
WRCEVA_000504	1,556	A	2,828	2,499	0	328	1	11.6%	ORF1ab	I431V
WRCEVA_000504	27,925	C	2,857	0	134	0	2,723	4.7%	ORF8	T11I
WRCEVA_000507	19,515	A	2,393	2,295	1	97	0	4.1%	-	-
WRCEVA_000508	9,756	G	1,376	28	0	1,348	0	2.1%	ORF1ab	R3164H
WRCEVA_000508	26,056	G	2092	0	86	2006	0	4.1%	ORF3a	D222Y
WRCEVA_000508	27,556	G	2066	128	0	1938	0	6.2%	ORF7a	A55T
WRCEVA_000509	11,956	C	1962	0	199	0	1,763	10.1%	-	-
WRCEVA_000509	17,245	C	4,062	2	470	0	3,590	11.6%	ORF1ab	R5661C
WRCEVA_000509	18,005	U	5,408	1	4,949	458	0	8.5%	ORF1ab	L5915R
WRCEVA_000509	25,569	U	3,448	4	3,326	113	5	3.5%	-	-
WRCEVA_000509	27,919	U	839	0	809	0	30	3.6%	ORF8	I9T
WRCEVA_000509	28,767	C	2011	0	109	0	1902	5.4%	N	T165I
WRCEVA_000511	3,003	U	2,880	79	2,787	1	13	2.7%	ORF1ab	V913E
WRCEVA_000511	10,738	U	4,580	0	4,440	0	140	3.1%	-	-
WRCEVA_000511	25,892	U	133	0	130	0	3	2.3%	ORF3a	I167T
WRCEVA_000511	28,001	G	1,414	1	29	1,384	0	2.1%	-	-
WRCEVA_000513	27,046	C	5,539	0	138	0	5,401	2.5%	M	T175M
WRCEVA_000514	11,603	A	5,405	5,075	0	330	0	6.1%	ORF1ab	M3780V
WRCEVA_000514	26,526	G	525	0	20	505	0	3.8%	M	A2S