TABLE 1.
The basic chloroplast genome information of L. cardiaca species.
| Category for genes | Group of genes | Name of genes |
|---|---|---|
| Photosynthesis related genes | Rubisco | rbcL |
| PhotosystemⅠ | psaA, psaB, psaC, psaI, psaJ | |
| Assembly/stability of photosystem Ⅰ | *ycf3, ycf4 | |
| Photosystem Ⅱ | psbA, psbB, psbC, psbD, psbE, psbF, psbH, psbI, psbJ, psbK, psbL, psbM, psbN, psbT, psbZ | |
| ATP synthase | atpA, atpB, atpE, *atpF, atpH, atpI | |
| Cytochrome b/f compelx | petA, *petB, *petD, petG, petL, petN | |
| Cytochrome c synthesis | ccsA | |
| NADPH dehydrogenase | *ndhA, *ndhB, ndhC, ndhD, ndhE, ndhF,ndhG, ndhH, ndhI, ndhJ, ndhK | |
| Transcription and translation related genes | Transcription | rpoA, rpoB, *rpoC1, rpoC2 |
| Ribosomal proteins | rps2, rps3, rps4, rps7, rps8, rps11, *rps12, rps14,rps15, *rps16, rps18, rps19,*rpl2, rpl14, *rpl16, rpl20, rpl22, rpl23, rpl32, rpl33,rpl36 | |
| Translation initiation factor | infA | |
| RNA genes | Ribosomal RNA | rrn5, rrn4.5, rrn16, rrn23 |
| Transfer RNA | *trnA-UGC, trnC-GCA, trnD-GUC, trnE-UUC, trnF-GAA, *trnG-UCC, trnG-GCC, trnH-GUG, trnI-CAU, *trnI-GAU,*trnK-UUU, trnL-CAA, *trnL-UAA, trnL-UAG, trnfM-CAUI,trnM-CAU, trnN-GUU, trnP-UGG, trnQ-UUG,trnR-ACG, trnR-UCU, trnS-GCU, trnS-GGA, trnS-UGA, trnT-GGU,trnT-UGU, trnV-GAC, *trnV-UAC, trnW-CCA, trnY-GUA | |
| Other genes | RNA processing | matK |
| Carbon metabolism | cemA | |
| Fatty acid synthesis | accD | |
| Proteolysis | *clpP | |
| Genes of unknown function | Conserved reading frames | ycf1, ycf2, ycf15 |
Intron-containing genes are marked by asterisks (*).