Figure - PMC

Skip to main content

An official website of the United States government

Here's how you know

Here's how you know

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

View full-text article in PMC

. 2021 Sep 9;24(10):103107. doi: 10.1016/j.isci.2021.103107

Search in PMC
Search in PubMed
View in NLM Catalog
Add to search

© 2021 The Author(s)

This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).

PMC Copyright notice

Search engine comparison using HLA class I data from two melanoma cell lines (Left column: Mel15 and Right column: Mel16), see also Table S1

(A and B) The total number of non-modified peptides (length between 8 and 12) identified by each method, with different colors indicating the number of methods supporting a particular peptide identification.

(C and D) The percentage of non-modified peptides covered by open-pFind identifications for each method.

(E and F) HLA-binder percentages for the overlapping identifications of the six methods (blue bar) and for the total (black bar) and unique (green bar) identifications of each method, respectively.

(G and I) Venn diagrams comparing peptide sequences from modified (mod) and non-modified (non-mod) peptides.

(H and J) The percentages of peptides with single and multiple modification sites, with the singly modified sites further divided by localization probability (Loc. Pro.) computed by PTMiner.