Table 4.
Descriptive population genetic estimates for the sampled pacu and tambaqui populations included in the validation of the array.
| Species | Population | n | SNPs MAF > 0.01 | Average MAF | Ho | He |
|---|---|---|---|---|---|---|
| Pacu | Hatchery 1 | 42 | 19,608 | 0.221 | 0.306 | 0.307 |
| Hatchery 2 | 21 | 18,461 | 0.214 | 0.307 | 0.294 | |
| Hatchery 3 | 13 | 14,199 | 0.235 | 0.402 | 0.313 | |
| Hatchery 4 | 18 | 19,856 | 0.210 | 0.285 | 0.292 | |
| All populations | 94 | 21,963 | 0.203 | 0.276 | 0.283 | |
| Tambaqui | Brazil—combined | 28 | 20,380 | 0.266 | 0.362 | 0.356 |
| Hatchery 5 | 9 | 19,572 | 0.267 | 0.39 | 0.357 | |
| Hatchery 6 | 9 | 17,172 | 0.268 | 0.426 | 0.352 | |
| Hatchery 7 | 10 | 19,078 | 0.274 | 0.379 | 0.365 | |
| Colombia—Hatchery 8 | 15 | 15,649 | 0.247 | 0.351 | 0.331 | |
| Peru—Hatchery 9 | 15 | 15,075 | 0.248 | 0.353 | 0.329 | |
| All populations | 58 | 21,072 | 0.247 | 0.306 | 0.338 | |
| Pirapitinga | Wild | 10 | 3042 | 0.278 | 0.454 | 0.348 |