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. 2021 Sep 29;12:5722. doi: 10.1038/s41467-021-25125-1

Fig. 1. Integration of six independent studies on single cell spinal cord data reveals the major cell types of the spinal cord.

Fig. 1

a Summary of the datasets used in this study, including the studies that used single-cell/nucleus RNA sequencing to analyze postnatal mouse spinal cord cell types (colored names above the gray bar) and additional studies that were used for focused aspects of the analysis below the gray bar. The age and technique (cell or nuclei isolation) is represented for each study. b UMAP presentation of the 52,623 cells/nuclei in the final dataset, without integration and colored by the study of origin (colors in the legend). c UMAP presentation of the same 52,623 cells/nuclei in the final dataset, integrated by study and colored by the study of origin (same colors as in (b)). d UMAP presentation of the cells/nuclei in the merged dataset, integrated by study and colored by cell type. e Dot plot of the expression of marker genes for the major coarse cell types. Average expression for each cluster is shown by color intensity and the percent of cells/nuclei in each cluster that expressed each gene is shown by dot diameter.