Table 2.
Lists of KRGS (Kimchi Response Gene Signature)
| Average of normalize RC (log2) | |||
|---|---|---|---|
| Genes | Non-infected | H. pylori | H. pylori + kimchi |
| TPRX1 | 1 | 0.006 | 0.449 |
| BPIFB6 | 1 | 0.008 | 0.585 |
| CCR4 | 1 | 0.008 | 0.724 |
| OR10J3 | 1 | 0.008 | 0.447 |
| OR14C36 | 1 | 0.007 | 0.592 |
| ANKRD33B | 1 | 0.008 | 0.397 |
| ABCA9-AS1 | 1 | 0.006 | 0.200 |
| LTA | 1 | 0.008 | 0.194 |
| NMNAT3 | 1 | 0.006 | 0.335 |
| SPINK13 | 1 | 0.006 | 0.441 |
| TDH | 1 | 0.012 | 0.380 |
| LMOD2 | 1 | 0.011 | 0.479 |
| ALB | 1 | 0.045 | 3.246 |
| ACP5 | 1 | 0.014 | 0.224 |
| RNY5 | 1 | 0.013 | 1.034 |
| TMEM255A | 1 | 0.011 | 0.524 |
| ZNF853 | 1 | 0.012 | 0.635 |
| ABCG5 | 1 | 0.010 | 0.499 |
| YPEL4 | 1 | 0.011 | 0.158 |
| COL6A4P1 | 1 | 0.011 | 0.863 |
| GYG2P1 | 1 | 0.009 | 0.675 |
| MTVR2 | 1 | 0.007 | 0.418 |
| CLDN8 | 1 | 0.009 | 0.567 |
| SYCP1 | 1 | 0.006 | 0.317 |
| SPDYE4 | 1 | 0.005 | 0.343 |
| CLEC9A | 1 | 0.008 | 0.589 |
| HEPACAM2 | 1 | 0.008 | 0.532 |
| OLIG2 | 1 | 0.007 | 0.493 |
| SEBOX | 1 | 0.005 | 0.472 |
| MAS1L | 1 | 0.008 | 0.456 |
| TDH | 1 | 0.012 | 0.380 |
| LMOD2 | 1 | 0.011 | 0.479 |
| ALB | 1 | 0.045 | 3.246 |
| ACP5 | 1 | 0.014 | 0.224 |
| RNY5 | 1 | 0.013 | 1.034 |
| TMEM255A | 1 | 0.011 | 0.524 |
| ZNF853 | 1 | 0.012 | 0.635 |
| ABCG5 | 1 | 0.010 | 0.499 |
| YPEL4 | 1 | 0.011 | 0.158 |
| COL6A4P1 | 1 | 0.011 | 0.863 |
| GYG2P1 | 1 | 0.009 | 0.675 |
| MTVR2 | 1 | 0.007 | 0.418 |
| CLDN8 | 1 | 0.009 | 0.567 |
| SYCP1 | 1 | 0.006 | 0.317 |
| SPDYE4 | 1 | 0.005 | 0.343 |
| CLEC9A | 1 | 0.008 | 0.589 |
| HEPACAM2 | 1 | 0.008 | 0.532 |
| OLIG2 | 1 | 0.007 | 0.493 |
| SEBOX | 1 | 0.005 | 0.472 |
| MAS1L | 1 | 0.008 | 0.456 |
| MLXIPL | 1 | 0.595 | 1.059 |
| LINC01508 | 1 | 0.593 | 0.729 |
| SNORA59A | 1 | 0.448 | 0.700 |
| SHANK2-AS3 | 1 | 0.467 | 0.970 |
| LINC01058 | 1 | 0.461 | 0.659 |
| FLJ16779 | 1 | 0.494 | 0.702 |
| CDH15 | 1 | 0.556 | 0.842 |
| LY6G6E | 1 | 0.412 | 0.518 |
| CAPS2 | 1 | 0.432 | 0.605 |
| LRRIQ1 | 1 | 0.456 | 0.793 |
| ZNF572 | 1 | 0.560 | 0.697 |
| LINC00886 | 1 | 0.460 | 0.756 |
| SULT1C2P1 | 1 | 0.495 | 0.566 |
| TSPAN32 | 1 | 0.273 | 0.718 |
| LOC102724434 | 1 | 0.269 | 0.881 |
| SPATA3-AS1 | 1 | 0.246 | 0.457 |
| C11orf53 | 1 | 0.241 | 0.448 |
| RHBDL3 | 1 | 0.210 | 0.549 |
| SGCG | 1 | 0.202 | 0.909 |
| CCM2L | 1 | 0.201 | 0.374 |
| SPDYC | 1 | 0.258 | 0.713 |
| BLNK | 1 | 0.273 | 0.617 |
| METTL11B | 1 | 0.285 | 0.525 |
| LMF1-AS1 | 1 | 0.251 | 0.384 |
| PSMB9 | 1 | 0.251 | 0.464 |
| LINC01600 | 1 | 0.249 | 0.382 |
| FLJ33360 | 1 | 0.247 | 0.482 |
| SLC4A3 | 1 | 0.244 | 1.129 |
| LINC01391 | 1 | 0.163 | 0.366 |
| ANO4 | 1 | 0.139 | 0.569 |
| HOXC-AS1 | 1 | 0.267 | 0.807 |
| HIST1H4L | 1 | 0.244 | 0.477 |
| ARHGAP6 | 1 | 0.277 | 0.493 |
| SPATA41 | 1 | 0.204 | 0.405 |
| KIAA1257 | 1 | 0.140 | 0.235 |
| HRCT1 | 1 | 0.299 | 0.560 |
| ZPBP2 | 1 | 0.013 | 0.710 |
| HLA-DPB1 | 1 | 0.012 | 0.825 |
| LINC01088 | 1 | 0.013 | 0.954 |
| MYBPH | 1 | 0.015 | 1.519 |
| MMP28 | 1 | 0.017 | 1.333 |
| TTC22 | 1 | 0.011 | 0.604 |
| IGFBP1 | 1 | 0.011 | 0.940 |
| SGCE | 1 | 0.018 | 0.886 |
| LINC00612 | 1 | 0.012 | 1.304 |
| FTCDNL1 | 1 | 0.011 | 1.308 |
| MLXIPL | 1 | 0.595 | 1.059 |
| LINC01508 | 1 | 0.593 | 0.729 |
| SNORA59A | 1 | 0.448 | 0.700 |
| SHANK2-AS3 | 1 | 0.467 | 0.970 |
| LINC01058 | 1 | 0.461 | 0.659 |
| FLJ16779 | 1 | 0.494 | 0.702 |
| CDH15 | 1 | 0.556 | 0.842 |
| LY6G6E | 1 | 0.412 | 0.518 |
| CAPS2 | 1 | 0.432 | 0.605 |
| LRRIQ1 | 1 | 0.456 | 0.793 |
| ZNF572 | 1 | 0.560 | 0.697 |
| LINC00886 | 1 | 0.460 | 0.756 |
| SULT1C2P1 | 1 | 0.495 | 0.566 |
| LOC283585 | 1 | 0.278 | 1.021 |
| TSPAN32 | 1 | 0.273 | 0.718 |
| SPATA3-AS1 | 1 | 0.246 | 0.457 |
| C11orf53 | 1 | 0.241 | 0.448 |
| RHBDL3 | 1 | 0.210 | 0.549 |
| SGCG | 1 | 0.202 | 0.909 |
| CCM2L | 1 | 0.201 | 0.374 |
| SPDYC | 1 | 0.258 | 0.713 |
| BLNK | 1 | 0.273 | 0.617 |
| METTL11B | 1 | 0.285 | 0.525 |
| LMF1-AS1 | 1 | 0.251 | 0.384 |
List of genes showing significant difference between non-infected vs H. pylori infected vs H. pylori + kimchi (significantly decreased after H. pylori, but significantly increased after H. pylori in the presence of kimchi, p<0.05).