Table 15.
The first 10 enriched pathways (sorted by the relevance of p value ) obtained from BiP performing PEA using TC genes lists and the Reactome database
Pathway Name | p value | FDRc | Bc |
---|---|---|---|
(1) Mitotic Prometaphase | 7.74 × 10 | 2.52 × 10 | 1.51 × 10 |
(2) Membrane Trafficking | 3.61 × 10 | 8.80 × 10 | 7.04 × 10 |
(3) Signaling by Rho GTPases | 7.67 × 10 | 1.15 × 10 | 1.50 × 10 |
(4) Post-translational protein modification | 1.49 × 10 | 1.94 × 10 | 2.91 × 10 |
(5) Extracellular matrix organization | 1.40 × 10 | 1.36 × 10 | 2.72 × 10 |
(6) Metabolism of proteins | 2.48 × 10 | 2.11 × 10 | 4.85 × 10 |
(7) M Phase | 3.18 × 10 | 2.48 × 10 | 6.20 × 10 |
(8) Cell Cycle, Mitotic | 1.17 × 10 | 7.86 × 10 | 2.28 × 10 |
(9) Mitotic G1-G1/S phases | 1.17 × 10 | 7.59 × 10 | 2.28 × 10 |
(10) Cell Cycle | 1.58 × 10 | 9.64 × 10 | 3.08 × 10 |
In the table, FDRc represents the corrected p value using FDR corrector, and Bc refers to the corrected p value using Bonferroni corrector