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. 2021 Sep 30;22(Suppl 13):376. doi: 10.1186/s12859-021-04297-z

Table 4.

The intersection of the first 10 pathways (sorted by the relevance of p value 0.005) obtained from pathDIP by performing PEA using CC genes lists and the KEGG database

Pathway Name p value FDRc Bc
(1) Pathways in cancer 1.93 × 10-50 6.16 × 10-48 6.16 × 10-48
(2) Human papillomavirus infection 6.34 × 10-32 1.01 × 10-29 2.03 × 10-29
(3) Endocytosis 4.28 × 10-28 4.56 × 10-26 1.37 × 10-25
(4) Lysosome 8.40 × 10-28 6.72 × 10-26 2.69 × 10-25
(5) MicroRNAs in cancer 8.88 × 10-25 5.68 × 10-23 2.84 × 10-22
(6) Human T-cell leukemia virus 1 infection 1.42 × 10-24 7.59 × 10-23 4.56 × 10-22
(7) MAPK signaling 1.94 × 10-24 8.88 × 10-23 6.22 × 10-22
(8) PI3K-Akt signaling 5.31 × 10-22 1.54 × 10-20 1.70 × 10-19
(9) Cell cycle 1.47 × 10-21 3.92 × 10-20 4.70 × 10-19
(10) Autophagy-animal 1.92 × 10-19 3.07 × 10-18 6.13 × 10-17

In the table FDRc represents the corrected p value using FDR corrector, and Bc refers to the corrected p value by using Bonferroni corrector