TABLE 1.
Geneb | Strain | Genomic changes | Amino acid changes |
---|---|---|---|
ORF1ab | I | C1191T, C5051T, C5184T, C6539T, C9891T, T11418C, G14122A, C14408T, G15451A, C16466T, C20320T | P309L, P1596S, P1640L, H2092Y, A3209V, V3718A, G4620S, P4715L, G5063S, P5401L, H6686Y |
II | C4965T, A11201G, C14408T, G16852T, G17523T, A20396G, T20401G | T1567I, T3646A, P4715L, G5530C, M5753I, K6711R, S6713A | |
S | I | C21618G, G21987A, A22028G, 22029del–22034del, T22917G, C22995A, A23403G, C23604G, G24410A | T19R, G142D, R158G, E156del–F157del, L452R, T478K, D614G, P681R, D950N |
II | C21846T, G21987A, G22022A, T22917G, G23012C, A23403G, C23604G, A24775T | T95I, G142D, E154K, L452R, E484Q, D614G, P681R, Q1071H | |
ORF3a | I | C25469T | S26L |
II | C25469T | S26L | |
M | I | T26767C | I82T |
II | T26767G | I82S | |
ORF7a | I | C27739T, C27752T, T27638C | L116F, T120I, V82A |
II | T27638C | V82A | |
ORF8 | I | C27972T, 28248del–28253del | Q27,c D119del–F120del |
N | I | G28881T, G29402T, A28461G, G29427A | R203M, D377Y, D63G, R385K, S26L |
II | G28881T, G29402T | R203M, D377Y |
Del, deletion. Bold text indicates mutations that appear in both variants.
ORF, open reading frame; S, spike; M, membrane; N, nucleocapsid.
Stop codon.