Table 1.
Statistical summary of the datasets utilized in this study.
Dataset | Tissue | Case Samples | Control Samples | DEGs(Pval = 0.05) | DEGs (Pval = 0.05logFC = abs(1)) | Raw GSEA | Fisher GSEA |
---|---|---|---|---|---|---|---|
COVID-19 [33] | Peripheral blood mononuclear cells | 3 | 3 | 4453 | 2657 | 3627 | 446 |
GSE1297 [34] | Hippocampal CA1 tissue | 22 | 9 | 2313 | 238 | 6094 | 3998 |
GSE12685 [35] | Frontal Cortex | 6 | 8 | 3251 | 149 | 6094 | 3244 |
GSE28146 [35] | Hippocampal CA1 tissue | 22 | 8 | 3405 | 1107 | 6530 | 6206 |
GSE53695 [36] | Human Brain | 6 | 4 | 701 | 678 | 5956 | 950 |
GSE53697 [36] | Human Brain | 9 | 8 | 678 | 312 | 5269 | 794 |
GSE833 [37] | Spinal cord gray matter | 7 | 4 | 733 | 489 | 4897 | 4895 |
GSE4595 [38] | Motor Cortex | 11 | 9 | 632 | 431 | 6544 | 5855 |
GSE19332 [39] | Cervical Spinal cord | 3 | 7 | 4564 | 2644 | 6530 | 6528 |
GSE52672 [40] | Spinal cord homogenate | 10 | 10 | 163 | 80 | 4643 | 1464 |
GSE68605 [41] | motor neurons | 8 | 3 | 3171 | 1973 | 6530 | 6492 |
GSE32534 [42] | Pertitumoral neocortex tissue | 5 | 5 | 2048 | 451 | 6530 | 5174 |
GSE64810 [43] | Post-mortem Brain | 49 | 20 | 436 | 297 | 5230 | 748 |
GSE77558 [44] | iPSCs derived GABA MS-like neurons | 6 | 6 | 4155 | 293 | 6687 | 4170 |
GSE79666 [45] | Motor cortex | 7 | 7 | 1687 | 607 | 8568 | 1884 |
GSE97100 [46] | iPSC-derived brain microvascular endothelial cells | 8 | 4 | 2137 | 757 | 9434 | 2204 |
GSE32915 [47] | White matter brain tissue | 12 | 4 | 517 | 202 | 6560 | 6497 |
GSE38010 [48] | Brain Lesion | 5 | 2 | 1996 | 1996 | 8381 | 1890 |
GSE52139 [49] | Spinal Cord (periplaque regions) | 8 | 8 | 2703 | 1501 | 6405 | 6327 |
GSE7621 [50] | Postmortem human brain | 16 | 9 | 5949 | 885 | 6530 | 5712 |
GSE19587 [51] | Post-mortem Brain | 6 | 5 | 4150 | 2453 | 6094 | 6071 |
GSE20141 [52] | laser-dissected SNpc neurons | 10 | 8 | 7094 | 3614 | 6530 | 6530 |
GSE20333 [53] | Post-mortem human brains | 6 | 6 | 684 | 406 | 5570 | 5164 |
GSE28894 [54] | Parkinson's disease brain | 55 | 59 | 3943 | 265 | 6510 | 4710 |
GSE42966 [55] | post-mortem substantia nigra | 9 | 6 | 950 | 512 | 6560 | 6323 |
GSE68719 [56] | Post-mortem Brain | 29 | 44 | 664 | 227 | 6140 | 1020 |