Table 4.
Comprehensive MD simulation results of complex of retrieved hits with 6LU7.
| 6LU7 Complexes with Hits | Counter Ions | RMSD (Å) | RMSF (Å) | P-L Contacts & Percentage Occupancy |
|---|---|---|---|---|
| DB07042 | +32 Na, −30Cl | 2.4 | <1.5 | Cys160(53%), Thr111(86%), Ser158(60%), Gln110(80%), Phe294(50%), Asp248(50%), Ile106(40%), Asn151(19%), Ile152(8%), Asp153(10%) |
| DB13035 | +32 Na, −30Cl | 2.4 | <2.4 | Asp153(79%), Tyr154(65%), Phe294(38%), Thr111(40%), Asn151(39%), Phe8(45%), Gln110(10%), Ile152(15%), Ser158(10%) |
| DB13604 | +31 Na, −30Cl | 1.8 | <1.5 | Gln288(>100%), Gln290(80%), Asp289(98%), Lys137(35%), Gln127(10%), Tyr126(2%) |
| DB08253 | +32 Na, −30Cl | 1.6 | <1.5 | Gln288(>100%), Gln290(>100%), Gln127(60%), Lys5(99%) Lys137(21%), Tyr126(30%), Asp(2%) |