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. 2021 Aug 19;5(10):1367–1381. doi: 10.1038/s41559-021-01525-w

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© The Author(s) 2021

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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Extended Data Fig. 8 — a, PCA plot of biallelic SNPs in the population of A. thaliana and A. suecica for the A. thaliana subgenome of A. suecica (N=345,075 biallelic SNPs), of the analysed 13,647 genes in gene expression in addition to 500 bp up and downstream of each gene sequence b, Correlation of 𝜋 (pairwise genetic differences) and expression distance (that is, euclidean distance) for 14,041 genes (*=Bootstrapped 1000 times). c, PCA plot of biallelic SNPs in the population of A. arenosa (N.B. we had DNA sequencing for only 3 of the 4 accessions used in the expression analysis) and A. suecica for the A. arenosa subgenome of A. suecica (N= 1,761,708 biallelic SNPs), of the analysed 14,041 genes in gene expression in addition to 500 bp up and downstream of each gene sequence d, Correlation of Pi (pairwise genetic differences for mapped genomic regions) and expression distance (that is, euclidean distance) for 14,041 genes (*=Bootstrapped 1000 times). A. arenosa was too few samples to give reliable correlations and therefore is NA. Grey bars represent the 95 confidence intervals.