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. 2021 Aug 19;5(10):1382–1393. doi: 10.1038/s41559-021-01523-y

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© The Author(s) 2021

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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Fig. 5 — a, Clustering analysis of expression levels of reproduction-related genes (GO:0000003) in A. arenosa (Aar, A) and A.thaliana (Ler4, T) (Aar/Ath), F₁, Allo733 (733), Allo738 (738) and A. suecica (Asu). b, Density plot of correlation coefficients between expression and CG methylation levels of the reproduction-related genes from clusters 1, 2 and 4 in the A subgenome. c, CG methylation near genic regions of SMC3, PSD5A and AFB3 and their mRNA expression patterns in Aar, F₁, Allo733 (733), Allo738 (738) and Asu. Black arrows indicate the orientation of genes. SMC3, STRUCTURAL MAINTENANCE OF CHROMOSOMES3; PDS5A, PHYTOENE DESATURASE; AFB3, AUXIN SIGNALING F-BOX3. Scales indicate mRNA (0–20 and 0–100) and CG methylation density (0–1) levels. Different letters in mRNA (TPM) indicate statistical significance of P < 0.05 (ANOVA test, n = 3).

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