Figure - PMC

Skip to main content

An official website of the United States government

Here's how you know

Here's how you know

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

View full-text article in PMC

. 2021 Aug 19;5(10):1382–1393. doi: 10.1038/s41559-021-01523-y

Search in PMC
Search in PubMed
View in NLM Catalog
Add to search

© The Author(s) 2021

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

PMC Copyright notice

Extended Data Fig. 1 — a, Proportion of genes and TEs (left) and TE classes (right) in A. thaliana (Col) and in A and T subgenomes of Allo738 (738) and sA and sT subgenome of A. suecica (Asu). b, Distances of the nearest TE from each gene in sT and sA subgenomes of Asu (upper panel) and in Col (cT) and A subgenome (Aar-related) of Allo738 (lower panel). c, d, Genomic features of A. suecica (c) and A. arenosa (d) genome. (1) Chromosome ideogram; (2) Gene density; (3) TE density; (4)-(6) SNP (4), indel (5) identity, and aligned regions (6) between A. suecica and Col or A (c) or between A and A. lyrata genomes (d); (7) synteny of sA and sT homologous gene pairs (c) or paralogous gene pairs (d). Colours in (1) indicate T (blue) and A (green) or related subgenomes; colour scales in (2) and (3) indicate high (dark purple) to low (white) density; densities (2)-(5) were shown per 100-kb windows; only gene pairs in syntenic blocks spanning 30 genes were shown in (7).

Source data