Figure - PMC

Skip to main content

An official website of the United States government

Here's how you know

Here's how you know

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

View full-text article in PMC

. 2021 Aug 19;5(10):1382–1393. doi: 10.1038/s41559-021-01523-y

Search in PMC
Search in PubMed
View in NLM Catalog
Add to search

© The Author(s) 2021

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

PMC Copyright notice

Extended Data Fig. 3 — a, Inversions between sT of Asu and Col-T (Ath) or between sA of Asu and A (Ara-related) of Allo738. b, Proportion of co-linear and non-co-linear regions between A and T. Three asterisks indicate statistical significance level of P < 0.001 (Fisher’s exact test). c, Proportion of SNP and indel distributions in sA and sT subgenomes of Asu relative to A and cT genomes. Non-co-linear: not collinear; INV: inversion; TP: transpositions; TLs: translocations within a subgenome; TLb: translocations between T and A subgenomes. d, Distribution of Ks values for a set of 14,668 single-copy genes among A subgenome (Aar-related) of 738, cT (Ath, Col), sT and sA subgenomes of Asu, and A. lyrata (Aly). e, Distribution of Ks values between genes in co-linear and TLb regions (co-linear regions: sA vs A, sT vs cT; TLb regions: sT vs A, sA vs cT). One asterisk indicates statistical significance level of P < 0.05 (Mann–Whitney U-test). f, Distribution of Ka values between A and col-T (cT), A. lyrata (Aly), and sT and sA subgenomes of Asu. g, Distribution of Ka/Ks values as in (f). h, Boxplots of the estimated time (million years ago, MYA) for intact LTR insertions in 25 A. thaliana ecotypes. The red dashed line indicates the median of time in sT (ANOVA test).

Source data