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. 2021 Sep 30;19:145. doi: 10.1186/s43141-021-00240-0

Table 4.

List of matches to the query motif from the database JASPAR2018_CORE_vertebrates_non redundant and Uniprobe mouse

S no Match name Data base E-value Over lap Offset Orientation Function
1 (MA0016.1(usp) JASPAR2018_CORE_vetebrates_non redundant 1.91e−01 10 0 Normal Receptor for ecdysone. May be an important modulator of insect metamorphosis. Plays an important part in embryonic and post-embryonic development
2 MA0359.1(RAP1) JASPAR2018_CORE_vetebrates_non redundant 7.76e−01 10 −2 Reverse complement Rap1 is predominantly involved in cell adhesion and cell junction formation.
3 MA0159,1(RARA:: RXRA) JASPAR2018_CORE_vetebrates_non redundant 1.25e+00 17 −1 Normal Receptor for retinoic acid. Retinoic acid receptors bind as heterodimers to their target response elements in response to their ligands, all-trans or 9-cis retinoic acid, and regulate gene expression in various biological processes.
4 MA1149.1 (RARA :: RXRG) JASPAR2018_CORE_vetebrates_non redundant 2.24e+00 18 0 Normal Receptor for retinoic acid. Retinoic acid receptors bind as heterodimers to their target response elements in response to their ligands, all-trans or 9-cis retinoic acid, and regulate gene expression in various biological processes
5 MA0258.2 (ESR2) JASPAR2018_CORE_vetebrates_non redundant 3.76e+00 15 −1 Reverse complement Its molecular function is transcription, transcription regulation
6 UP00070_2(Gcm1_secondary) Uniprobe mouse 6.48e+00 17 0 Normal The transcription factor glial cells missing 1 (Gcm1) plays a pivotal role in labyrinth development
7 MA0450.1(hkb) JASPAR2018_CORE_vetebrates_non redundant 9.09e+00 9 −11 Normal As a repressor, hkb assures that the formation of mesoderm (by ventral invagination of the presumptive mesoderm) does not spread to the two poles of the egg.
8 MA0801.1 (MGA) JASPAR2018_CORE_vetebrates_non redundant 9.30e+00 8 −12 Normal Functions as a dual-specificity transcription factor, regulating the expression of both MAX-network and T-box family target genes. Functions as a repressor or an activator.