Table 4.
List of matches to the query motif from the database JASPAR2018_CORE_vertebrates_non redundant and Uniprobe mouse
S no | Match name | Data base | E-value | Over lap | Offset | Orientation | Function |
---|---|---|---|---|---|---|---|
1 | (MA0016.1(usp) | JASPAR2018_CORE_vetebrates_non redundant | 1.91e−01 | 10 | 0 | Normal | Receptor for ecdysone. May be an important modulator of insect metamorphosis. Plays an important part in embryonic and post-embryonic development |
2 | MA0359.1(RAP1) | JASPAR2018_CORE_vetebrates_non redundant | 7.76e−01 | 10 | −2 | Reverse complement | Rap1 is predominantly involved in cell adhesion and cell junction formation. |
3 | MA0159,1(RARA:: RXRA) | JASPAR2018_CORE_vetebrates_non redundant | 1.25e+00 | 17 | −1 | Normal | Receptor for retinoic acid. Retinoic acid receptors bind as heterodimers to their target response elements in response to their ligands, all-trans or 9-cis retinoic acid, and regulate gene expression in various biological processes. |
4 | MA1149.1 (RARA :: RXRG) | JASPAR2018_CORE_vetebrates_non redundant | 2.24e+00 | 18 | 0 | Normal | Receptor for retinoic acid. Retinoic acid receptors bind as heterodimers to their target response elements in response to their ligands, all-trans or 9-cis retinoic acid, and regulate gene expression in various biological processes |
5 | MA0258.2 (ESR2) | JASPAR2018_CORE_vetebrates_non redundant | 3.76e+00 | 15 | −1 | Reverse complement | Its molecular function is transcription, transcription regulation |
6 | UP00070_2(Gcm1_secondary) | Uniprobe mouse | 6.48e+00 | 17 | 0 | Normal | The transcription factor glial cells missing 1 (Gcm1) plays a pivotal role in labyrinth development |
7 | MA0450.1(hkb) | JASPAR2018_CORE_vetebrates_non redundant | 9.09e+00 | 9 | −11 | Normal | As a repressor, hkb assures that the formation of mesoderm (by ventral invagination of the presumptive mesoderm) does not spread to the two poles of the egg. |
8 | MA0801.1 (MGA) | JASPAR2018_CORE_vetebrates_non redundant | 9.30e+00 | 8 | −12 | Normal | Functions as a dual-specificity transcription factor, regulating the expression of both MAX-network and T-box family target genes. Functions as a repressor or an activator. |