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. 2021 Oct 1;16(10):e0257911. doi: 10.1371/journal.pone.0257911

Table 4. Summary of interactions of relevant genes for various drugs in hypomorph library with 162 essential genes.

drug # genes with significant negative interactions (Zrobust<-3.5, Padj<0.05) known target of drug genes related to drug mechanism of action #rank (Zrobust)
levofloxacin 9 gyrA #4: gyrA (-4.6)—DNA gyrase
moxifloxacin 10 gyrA #8: gyrA (-5.5)—DNA gyrase
isoniazid 9 (inhA) * #2: ino1 (-19.6)—inositol-3-phosphate synthase
#11: kasB (-4.4)—ketoacyl synthase
fidaxomicin 7 rpoB #9: rpoB (-5.0)—RNA polymerase beta subunit
sulfamethoxazole 20 (folP1) * #7: thyA (-11.1)–thymidylate synthase
bedaquiline 4 (atpE)* #9: atpB (-2.8)—subunit of ATP synthase
#13: atpH (-2.2)—subunit of ATP synthase
#23: atpF (-1.3)—subunit of ATP synthase
#38: atpG (-0.8)—subunit of ATP synthase

† does not exceed the outlier cutoff of Zrobust<-3.5, but still has a negative slope showing synergy with the drug

* gene not represented in hypomorph library