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. 2021 May 14;19(10):1967–1978. doi: 10.1111/pbi.13610

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© 2021 The Authors. Plant Biotechnology Journal published by Society for Experimental Biology and The Association of Applied Biologists and John Wiley & Sons Ltd.

This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made.

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Analysis of multi‐copy oligos selected by Chorus. (a) Relationship between k‐mer score and copy numbers of the multi‐copy oligos. x‐axis represents the copy numbers of the oligos and y‐axis represents the k‐mer score of the oligos. Logarithmic values are used with 10 as base for y‐axis. (b) A representative multi‐copy oligo (arrow) mapped to a LTR retrotransposon. This oligo is related to the long terminal repeats (LTR) region of the retrotransposon. It was mapped to chromosome 1 only in APGv3, but was mapped to three locations on both chromosomes 1 and 5 in APGv4. K‐mer scores of each 17‐mer associated with this oligo are shown.