Skip to main content
. 2021 Oct 1;11:19545. doi: 10.1038/s41598-021-98889-7

Figure 2.

Figure 2

SeqCode ChIP-seq and RNA-seq profiles in mESCs for visualizing in genome browsers. (a) Actively transcribed region containing the Oct4/Pou5f1 pluripotency gene. (b) Region repressed for transcription by PcG proteins containing the HoxA complex. Raw data were retrieved from32,33,38,75. The SeqCode buildChIPprofile function (window size = 10) was used to generate each custom track from resulting BAM files. The SeqCode combineChIPprofiles function was used to generate the RNA-seq strand-specific profiles. Composite ChIP-seq and RNA-seq supertracks integrate all information from each individual track shown below.