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. 2021 Oct 1;11:19545. doi: 10.1038/s41598-021-98889-7

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© The Author(s) 2021

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.

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Basic analysis of the H3K4me3 ChIP-seq sample in mESCs using SeqCode. (a) From left to right: average distributions around the TSS of H3K4me3 target genes (produceTSSplots), along the gene body of the same genes (produceGENEplots), and around the center of H3K4me3 peaks (producePEAKplots). (b) From left to right: heatmap around the TSS of H3K4me3 target genes (produceTSSmaps), along the gene body of the same genes (produceGENEmaps), and around the center of H3K4me3 peaks (producePEAKmaps). (c) Basic and detailed genome distribution of H3K4me3 peaks (genomeDistribution). (d) ChIP-seq signal levels of selected genes (recoverChIPlevels). Raw data were retrieved from³².