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. 2021 Sep 28;37(2):109825. doi: 10.1016/j.celrep.2021.109825
REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies

Casirivimab Laboratory of Hans-Martin Jäck N/A
Imdevimab Laboratory of Hans-Martin Jäck N/A
Bamlanivimab Laboratory of Hans-Martin Jäck N/A
Etesevimab Laboratory of Hans-Martin Jäck N/A
hIgG Laboratory of Hans-Martin Jäck N/A
Goat anti-Human IgG (H+L) Cross-Adsorbed Secondary Antibody, Alexa Fluor 488 Thermo Fisher Scientific Cat# A-11013; RRID: AB_2534080
Anti-VSV-G antibody (I1, produced from CRL-2700 mouse hybridoma cells) ATCC Cat# CRL-2700; RRID: CVCL_G654

Bacterial and virus strains

VSVΔG-FLuc Laboratory of Gert Zimmer N/A
One Shot OmniMAX 2 T1R Chemically Competent E. coli Thermo Fisher Scientific Cat# C854003

Biological samples

Patient Plasma (SI 15) Laboratory of Martin Sebastian Winkler N/A
Patient Plasma (SI 18) Laboratory of Martin Sebastian Winkler N/A
Patient Plasma (SI 22) Laboratory of Martin Sebastian Winkler N/A
Patient Plasma (SI 23) Laboratory of Martin Sebastian Winkler N/A
Patient Plasma (SI 24) Laboratory of Martin Sebastian Winkler N/A
Patient Plasma (SI 27) Laboratory of Martin Sebastian Winkler N/A
Patient Plasma (SI 33) Laboratory of Martin Sebastian Winkler N/A
Patient Plasma (SI 51) Laboratory of Martin Sebastian Winkler N/A
Vaccinee Serum (ID4844) Laboratory of Georg M.N. Behrens N/A
Vaccinee Serum (ID4846) Laboratory of Georg M.N. Behrens N/A
Vaccinee Serum (ID4847) Laboratory of Georg M.N. Behrens N/A
Vaccinee Serum (ID4848) Laboratory of Georg M.N. Behrens N/A
Vaccinee Serum (ID4849) Laboratory of Georg M.N. Behrens N/A
Vaccinee Serum (ID4863) Laboratory of Georg M.N. Behrens N/A
Vaccinee Serum (ID4864) Laboratory of Georg M.N. Behrens N/A
Vaccinee Serum (ID4865) Laboratory of Georg M.N. Behrens N/A
Vaccinee Serum (ID4866) Laboratory of Georg M.N. Behrens N/A
Vaccinee Serum (ID4867) Laboratory of Georg M.N. Behrens N/A
Vaccinee Serum (ID4868) Laboratory of Georg M.N. Behrens N/A
Vaccinee Serum (ID4872) Laboratory of Georg M.N. Behrens N/A
Vaccinee Serum (ID4874) Laboratory of Georg M.N. Behrens N/A
Vaccinee Serum (ID4876) Laboratory of Georg M.N. Behrens N/A
Vaccinee Serum (ID4877) Laboratory of Georg M.N. Behrens N/A

Chemicals, peptides, and recombinant proteins

Soluble human ACE2 (sol-hACE2-Fc) Laboratory of Stefan Pöhlmann N/A

Critical commercial assays

Beetle-Juice Kit PJK Cat# 102511

Experimental models: Cell lines

293T DSMZ Cat# ACC-635; RRID: CVCL_0063
A549 (ACE2) Laboratory of Stefan Pöhlmann N/A
BHK-21 Laboratory of Georg Herrler ATCC Cat# CCL-10; RRID:CVCL_1915
Caco-2 Laboratory of Stefan Pöhlmann ATCC Cat# HTB-37; RRID: CVCL_0025
Calu-3 Laboratory of Stephan Ludwig ATCC Cat# HTB-55; RRID: CVCL_0609
Vero76 Laboratory of Andrea Maisner ATCC Cat# CRL-1586; RRID: CVCL_0574

Oligonucleotides

SARS-2-S (BamHI) F (AAGGCCGGATCCG
CCACCATGTTCGTGTTTCTGGTGCTGC)
Sigma-Aldrich N/A
SARS-2-SΔ18 (XbaI) R (AAGGCCTCTAG
ACTACTTGCAGCAGCTGCCACAG)
Sigma-Aldrich N/A
SARS-2-S (T19R) F (GTGAACCTGCGCAC
AAGAACCCAGCTGCCTCCAGC)
Sigma-Aldrich N/A
SARS-2-S (T19R) R (GTTCTTGTGCGCAG
GTTCACACACTGGCTGGAC)
Sigma-Aldrich N/A
SARS-2-S (E142D) F (CCTTCCTGGACGTC
TACTATCACAAGAAC)
Sigma-Aldrich N/A
SARS-2-S (E142D) R (TAGTAGACGTCCAGGAAGGGGTCGTTG
CAGAAC)
Sigma-Aldrich N/A
SARS-2-S (E142D/E156G/F157Δ/R158Δ) Hyb F (GTTCTGCAACGACCCCTTCCTG
GACGTCTACTATCACAAGAACAACAA
GAGCTGG)
Sigma-Aldrich N/A
SARS-2-S (E142D/E156G/F157Δ/R158Δ) Hyb R (CAGTTGTTGGCGCTGCTGTACA
CCCCGCTTTCCATCCAGCTCTTGTTGTT
CTTGTGATAG)
Sigma-Aldrich N/A
SARS-2-S (E156G/F157Δ/R158Δ) F (TGGAAAGCGGGGTGTACAGCA
GCGCCAACAACTGC)
Sigma-Aldrich N/A
SARS-2-S (E156G/F157Δ/R158Δ) R (GCTGTACACCCCGCTTTCCAT
CCAGCTCTTGTTG)
Sigma-Aldrich N/A
SARS-2-S (L452R) F (TACAATTACCG
GTACCGGCTGTTCCGGAAGTC)
Sigma-Aldrich N/A
SARS-2-S (L452R) R (CAGCCGGTACc
GGTAATTGTAGTTGCCGCCGAC)
Sigma-Aldrich N/A
SARS-2-S (L452R/T478K) Hyb F (ACAATTACCGGTACCGGCTGTTCCG
GAAGTCCAATCTGAAGCCCTTCGAG
CGGGACATC)
Sigma-Aldrich N/A
SARS-2-S (L452R/T478K) Hyb R (TTACAAGGTTTGCTGCCGGCCTG
ATAGATCTCGGTGGAGATGTCCC
GCTCGAAGGGCTTC)
Sigma-Aldrich N/A
SARS-2-S (T478K) F (CCGGCAGCA
AACCTTGTAACGGCGTGGAAGGCTTC)
Sigma-Aldrich N/A
SARS-2-S (T478K) R (GTTACAAGGTTT
GCTGCCGGCCTGATAGATCTCG)
Sigma-Aldrich N/A
SARS-2-S (P681R) F (CAAACAGCCGC
AGACGGGCCAGATCTGTG)
Sigma-Aldrich N/A
SARS-2-S (P681R) R (GCCCGTCTGC
GGCTGTTTGTCTGTGTCTG)
Sigma-Aldrich N/A
SARS-2-S (D950N) F (AAGCTGCAGAA
CGTGGTCAACCAGAATGCCCAGG)
Sigma-Aldrich N/A
SARS-2-S (D950N) R (TGACCACGTTCT
GCAGCTTTCCCAGGGCGCTTGC)
Sigma-Aldrich N/A
SARS-2-S Seq-01 (CAAGATCTACAGCAAGCACACC) Sigma-Aldrich N/A
SARS-2-S Seq-02 (GTCGGCGGCAACTACAATTAC) Sigma-Aldrich N/A
SARS-2-S Seq-03 (CTGTCTGATCGGAGCCGAGCAC) Sigma-Aldrich N/A
SARS-2-S Seq-04 (TGAGATGATCGCCCAGTACAC) Sigma-Aldrich N/A
SARS-2-S Seq-05 (GCCATCTGCCACGACGGCAAAG) Sigma-Aldrich N/A
pCG1 F (CCTGGGCAACGTGCTGGT) Sigma-Aldrich N/A
pCG1 R (GTCAGATGCTCAAGGGGCTTCA) Sigma-Aldrich N/A

Recombinant DNA

Plasmid: pCG1 Laboratory of Roberto Cattaneo N/A
Plasmid: pCAGGS-VSV-G Laboratory of Stefan Pöhlmann N/A
Plasmid: pCAGGS-DsRed Laboratory of Stefan Pöhlmann N/A
Plasmid: pCG1-SARS-2-SΔ18 (D614G), codon-optimized Laboratory of Stefan Pöhlmann N/A
Plasmid: pCG1-SARS-2-SΔ18 (B.1.351), codon-optimized Laboratory of Stefan Pöhlmann N/A
Plasmid: pCG1-SARS-2-SΔ18 (B.1.617.2), codon-optimized Laboratory of Stefan Pöhlmann N/A
Plasmid: pCG1-solACE2-Fc Laboratory of Stefan Pöhlmann N/A

Software and algorithms

Hidex Sense Microplate Reader Software Hidex Deutschland Vertrieb GmbH https://www.hidex.de
YASARA (version 19.1.27) YASARA Biosciences GmbH http://www.yasara.org
Adobe Photoshop CS5 Extended (version 12.0 × 32) Adobe https://www.adobe.com/
GraphPad Prism (version 8.3.0(538)) GraphPad Software https://www.graphpad.com/
ZEN imaging software Carl Zeiss https://www.zeiss.com/corporate/int/home.html
Microsoft Office Standard 2010 (version 14.0.7232.5000) Microsoft Corporation https://www.microsoft.com/microsoft-365

Other

Complex of SARS-CoV-2 receptor binding domain with the Fab fragments of two neutralizing antibodies (PDB: 6XDG) Hansen et al., 2020 https://www.rcsb.org/structure/6XDG
SARS-CoV 2 Spike Protein bound to LY-CoV555 (PDB: 7L3N) Jones et al., 2020 https://www.rcsb.org/structure/7L3N
Molecular basis for a potent human neutralizing antibody targeting SARS-CoV-2 RBD (PDB: 7C01) Shi et al., 2020 https://www.rcsb.org/structure/7C01
Distinct conformational states of SARS-CoV-2 spike protein (PDB: 6XR8) Cai et al., 2020 https://www.rcsb.org/structure/6XR8