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Graphical representation of mean sequence depth on the spike gene. The line graph represents the mean sequence depth in log10 scale of the spike gene. Top two graphs using v1, middle two graphs v2, and the last two using v3 of EasySeq™ RC-PCR SARS-CoV-2 WGS kit. HV69–70- and Y144- indicate the region of known alpha variant deletions. Region indicated the amplicon 123 region which resulted in a lower coverage compared to average in v3.
