Table 3.
The proportion of genes associated with neuronal and synaptic functions.
| Neuronal genes (observed) | Corresponding genes | Expected | Observed/expected | P -value | |
|---|---|---|---|---|---|
| Responder | |||||
| Changed methylation sites | 300 (16.8%) | 1,789 | 277.5 | 1.081 | 0.008 |
| DEGs around changed methylation sites | 30 (35.7%) | 84 | 13 | 2.302 | 2.96.E-06 |
| Gene body (same direction) and Promoter (opposite direction) | 19 (40.4%) | 47 | 7.3 | 2.606 | 2.53.E-05 |
| Non-responder | |||||
| Changed methylation sites | 190 (16.6%) | 1,145 | 177.6 | 1.07 | 0.019 |
| DEGs around changed methylation sites | 1 (6.7%) | 15 | 2.3 | 0.43 | 0.22 |
| Gene body (same direction) and Promoter (opposite direction) | 0 (0.0%) | 5 | 0.8 | 0 | 0.43 |
P-values were calculated by hypergeometric distribution test.