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. Author manuscript; available in PMC: 2021 Oct 4.
Published in final edited form as: J Bone Miner Res. 2021 Feb 2;36(4):729–738. doi: 10.1002/jbmr.4240

Table 6.

Two-sample Mendelian randomization results for FN-BMD and LS-BMD

Exposure (Metabolite) Outcome
(BMD)
IVW beta IVW p-value Weighted median beta Weighted median p-value Q statistic p-value Egger regression intercept p-value
leucine FN BMD −0.028 0.63 −0.057 0.34 0.22 0.75
LS BMD 0.071 0.19 0.074 0.24 0.35 0.72
glycine FN BMD −0.033 2.51×10−5 −0.040 6.82×10−4 0.98 0.87
LS BMD −0.013 0.14 −0.017 0.16 0.89 0.71
creatinine FN BMD 0.074 0.39 0.169 0.03 0.01 1.08×10−4
LS BMD 0.146 0.02 0.164 0.04 0.16 3.90×10−3
PC FN BMD −0.066 6.89×10−3 −0.043 0.19 0.84 0.05
LS BMD −0.136 1.84×10−7 −0.106 2.96×10−3 0.57 0.30
SM FN BMD −0.017 0.75 −0.011 0.84 0.06 0.21
LS BMD −0.145 0.01 −0.164 7.41×10−3 0.05 0.03
TAG FN BMD −0.065 7.46×10−3 −0.033 0.35 0.78 0.59
LS BMD −0.070 0.02 −0.039 0.35 0.18 0.54

Genetic information of above six metabolites (exposure) and two outcomes, FN-BMD and LS-BMD, are available from the summary statistics of GWAS.23,24 IVW (inverse variance weighted) beta estimates the causal effect of each selected metabolite on BMD, either FN-BMD or LS-BMD. Q statistic p-value less than 0.05 indicates the instrumental heterogeneity for each selected metabolite. Egger regression intercept p-value less than 0.05 implicates the horizontal pleiotropy for the instrumental variants of each selected metabolite. IVW p-value less than 0.05 while both Q-statistics p-value and Egger regression intercept p-value greater than 0.05 was set as the significance level. Bold ones are the metabolites with significant causal effect on either FN-BMD or LS-BMD. BMD=bone mineral density. FN=femoral neck. LS=lumbar spine. IVW=inverse-variance weighted. PC=phosphatidylcholine. SM=Sphingomyelin. TAG=Triacylglycerol.