Table 2.
Stability ranking of the seven reference genes using four different algorithms
ΔCq | geNorm | NormFinder | BestKeeper | RefFinder | |||||
---|---|---|---|---|---|---|---|---|---|
Gene | SD | Gene | M | Gene | SV | Gene | r | Gene | GM |
β-actin | 0.95 | β-actin | 0.29 | GAPDH | 0.31 | GAPDH | 0.972 | β-actin | 3.15 |
RPL40 | 1.02 | RPL40 | 0.31 | β-actin | 0.33 | β-actin | 0.961 | GAPDH | 3.46 |
GAPDH | 1.03 | GAPDH | 0.32 | RPL40 | 0.45 | EF1-β | 0.953 | RPL40 | 3.59 |
ARF1 | 1.13 | 18SrRNA | 0.39 | 18SrRNA | 0.49 | RPL40 | 0.942 | β-TUB | 4.03 |
18SrRNA | 1.15 | β-TUB | 0.48 | EF1-β | 0.56 | β-TUB | 0.932 | EF1-β | 5.12 |
EF1-β | 1.23 | EF1-β | 0.55 | β-TUB | 0.79 | ARF1 | 0.904 | 18SrRNA | 5.69 |
β-TUB | 1.31 | ARF1 | 0.69 | ARF1 | 0.94 | 18SrRNA | 0.877 | ARF1 | 6.37 |
GM, geometric mean; M, average of expression stability values; r, Pearson correlation coefficient; SV, stability value.