Table 1.
Rickettsia species available in GenBank with high identity of individual genes to Tillamook 23
|
Rickettsia species |
16s rRNA (%) |
gltA (%) |
ompA (%) |
ompB (%) |
sca4 (%) |
17 kDa (%) |
Country |
Vector |
Reference |
|---|---|---|---|---|---|---|---|---|---|
|
Uncultured Rickettsia sp. clone P4 |
– |
96.7 |
95.1 |
– |
– |
– |
Turkey |
Haemaphysalis parva |
[46] |
|
Rickettsia sp. RF2125 |
– |
97.2 |
– |
– |
– |
– |
Vietnam |
Ctenocephalides felis |
[47] |
|
Rickettsia sp. genotype RF2125 isolate T29C9 |
– |
96.9 |
– |
– |
– |
– |
Thailand |
Ctenocephalides felis |
[48] |
|
Rickettsia sp. genotype RF2125 isolate AL866-1 |
– |
96.7 |
94 |
– |
– |
– |
USA |
Ctenocephalides felis |
[49] |
|
Rickettsia endosymbiont of Haemaphysalis sulcata |
– |
96.7 |
– |
– |
– |
96.4 |
Croatia |
Hemaphysalis sulcata |
[32] |
|
Rickettsia sp. clone: RT2 |
– |
95.6 |
– |
– |
– |
97.8 |
Indonesia |
Amblyomma varanense |
[50] |
|
Rickettsia sp. 777 c |
– |
– |
– |
88.8 |
– |
97.8 |
Australia |
Amblyomma fimbriatum Koch |
[51] |
|
Candidatus ‘Rickettsia senegalensis’ isolate Cf_US_0036D |
97.9 |
– |
– |
88.7 |
97.6 |
– |
USA |
Ctenocephalides felis |
[31] |
|
Rickettsia sp. cf9 |
97.9 |
|
|
92 |
97.5 |
|
USA |
Ctenocephalides felis |
Genbank: DQ287314-5, DQ379483 |
|
Rickettsia endosymbiont of Ctenocephalides felis isolate CF26B/US |
97.8 |
97.2 |
92.8 |
93.5 |
95.4 |
|
USA |
Ctenocephalides felis |
[52] |
|
Rickettsia sp. A12.2646 |
97.6 |
99.2 |
|
89.6 |
93.5 |
99.8 |
Korea |
Mansonia uniformis |
[53] |
|
Rickettsia secondary symbiont Curculio camelliae |
96.1 |
– |
– |
– |
– |
– |
Japan/SE Asia |
Curculionini camilliae |
[54] |
|
Rickettsia secondary symbiont Curculio hilgendorfi |
96.1 |
– |
– |
– |
– |
– |
Japan/SE Asia |
Curculionini hilgendorfi |
[54] |
|
Candidatus ‘Rickettsia senegalensis’ strain PU01-02 |
96 |
96.7 |
– |
89.5 |
96.1 |
– |
Senegal |
Ctenocephalides felis |
[23] |
|
Rickettsia asiatica Maytaro1284 DNA |
95.9 |
95.3 |
89.2 |
86.9 |
86 |
95.6 |
Japan |
Ixodes ovatus |
[55] |
|
Rickettsia sp. DnS28 strain DnS28 |
95.9 |
94.7 |
90.3 |
– |
– |
– |
Russia |
Dermacentor nuttallii |
[56] |
|
Rickettsia sp. RpA4 strain RpA4 |
95.9 |
94.9 |
90.4 |
– |
– |
– |
Russia |
Rhipicephalus pumilio |
[56] |
|
Rickettsia sp. TwKM01 |
95.7 |
94.5 |
89.3 |
89 |
85.5 |
94.4 |
Taiwan |
Rhipicephalus haemaphysaloides |
[57] |
|
Rickettsia sp. DnS14 |
95.7 |
94.8 |
90.3 |
– |
– |
– |
Russia |
Dermacentor nuttallii |
[56] |
|
Candidatus ‘Rickettsia wissemanii’ isolate G1329 |
95.6 |
94.5 |
89.4 |
86.2 |
85.3 |
– |
French Guiana |
Ornithodoros hasei |
[58] |
|
Rickettsia sp. Chad |
95.5 |
94.2 |
87.8 |
– |
– |
– |
Chad |
Unknown |
[59] |
|
Candidatus ‘Rickettsia barbariae’ |
95.4 |
94.1 |
86 |
88.3 |
84.9 |
– |
Italy |
Rhipicephalus turanicus |
[60] |
|
Rickettsia sp. IRS4 |
95.4 |
94.8 |
90.3 |
– |
87.5 |
– |
Slovakia |
Ixodes ricinus |
[61] |