Table 2.
The statistically different genera and species within three groups.
| Relative abundance | ||||
|---|---|---|---|---|
| Taxa | Group A | Group B | Q -value | Method of analysis |
| g_Streptococcus | 0.02433 | 0.003354 | 0.0126152505689353 | Metastat analysis |
| P -value | ||||
| g_Pseudomonas | 0.001136 | 0.000561 | 0.039 | t-test analysis |
| g_Lactobacillus; s_Lactobacillus_iners | 0.398547 | 0.26135 | 0.0108516346283056 | |
| g_Lactobacillus; s_Lactobacillus_jensenii | 0.008099 | 0.026327 | 0.049470925029558 | |
| g_unidentified_Prevotellaceae; s_Prevotella_sp_S7-1-8; | 0.0003 | 0.002227 | 0.0306323059117605 | |
| Kruskal-Wallis test P -value | ||||
| g_Stenotrophomonas | 0.03043 | 0.026599 | 0.0297206112644/LDA = 4.01923299368 | LEfSe analysis |
| g_Delftia | 0.002311 | 0.00627 | 0.0425357324452 | |
| g_Lactobacillus. s_Lactobacillus_intestinalis | 0.001403 | 0.000984 | 0.0377816191524 | |
| g_Streptococcus. s_Streptococcus_agalactiae | 0.012113 | 0.000705 | 0.02937052722 | |
| g_Sneathia. s_Sneathia_amnii | 0.0079 | 0.017207 | 0.0384594169478 | |
| g_Delftia. s_Delftia_tsuruhatensis | 0.002311 | 0.00627 | 0.0425357324452 | |
| Taxa | Group A | Group C | Q -value | |
| g_unidentified_Prevotellaceae | 0.00112 | 0.01459 | 0.0165174192323514 | Metastat analysis |
| g_Dialister | 0.00503 | 0.01219 | 0.047162140185396 | |
| g_Bacteroides | 0.000999 | 0.002484 | 0.0255626726214962 | |
| g_Faecalibacterium | 0.000439 | 0.002269 | 0.00664908861630173 | |
| g_unidentified_Ruminococcaceae | 0.000512 | 0.002368 | 0.00664908861630173 | |
| P -value | ||||
| g_unidentified_Lachnospiraceae | 0.000597 | 0.001355 | 0.016 | t-test analysis |
| g_Dialister; s_Veillonellaceae_bacterium_DNF00626 | 0.002437 | 0.007826 | 0.015918456426067 | |
| Kruskal-Wallis test P -value | ||||
| g_Stenotrophomonas | 0.03043 | 0.009992 | 0.0170377050151/LDA = 4.03395504567 | LEfSe analysis |
| g_Delftia | 0.002311 | 0.001254 | 0.000862448621444 | |
| g_Bifidobacterium | 0.001164 | 0.002841 | 0.00161970367599 | |
| g_Mobiluncus | 0.000071 | 0.001019 | 0.0297397041713 | |
| g_Lactobacillus. s_Lactobacillus_reuteri | 0.003339 | 0.001218 | 0.0334917506149 | |
| g_Lactobacillus. s_Lactobacillus_intestinalis | 0.001403 | 0.000963 | 0.00822711615751 | |
| g_Streptococcus. s_Streptococcus_agalactiae | 0.012113 | 0.001076 | 0.0339276686372 | |
| g_unidentified_Prevotellaceae. s_Prevotella_sp_S7_1_8 | 0.0003 | 0.001714 | 0.0200107492257 | |
| g_Prevotella. s_Prevotella_disiens | 0.000149 | 0.007642 | 0.00168221295205 | |
| g_Sneathia. s_Sneathia_amnii | 0.0079 | 0.01751 | 0.00610185979889 | |
| g_Delftia. s_Delftia_tsuruhatensis | 0.002311 | 0.001254 | 0.000862448621444 | |
| Taxa | Group B | Group C | P -value | |
| g_Dialister | 0.005457 | 0.01219 | 0.0254409491678661 | t-test analysis |
| g_Dialister; s_Veillonellaceae_bacterium_DNF00626 | 0.003211 | 0.007826 | 0.0429323293790955 | |
| g_Dialister; s_Dialister_micraerophilus | 0.001564 | 0.003451 | 0.0156376539971847 | |
| Kruskal-Wallis test P -value | ||||
| g_Prevotella. s_Prevotella_disiens | 0.000377 | 0.007642 | 0.0233918186883 | LEfSe analysis |
| g_Sphingomonas. s_Sphingomonas_leidyi | 0.002984 | 0.000323 | 0.0407776966595 | |
| g_Moryella. s_Moryella_sp_KHD1 | 0.000206 | 0.001106 | 0.0445293042836 | |
All of the significant different genera and species have relative abundance more than 0.001.