Table 3.
Variants reaching genome-wide significance.
| Gene | dbSNP | Chr | Position | Reference allele | Risk allele | Risk allele frequency | Β | p | Source |
|---|---|---|---|---|---|---|---|---|---|
| Variants reaching genome-wide significant with antenatal vitamin D concentration: | |||||||||
| CYP2J2 | rs10789082 | 1 | 60,357,969 | A | G | 29.4% | −7.68 | 1.5×10−8 | Typed |
| GC | rs17467825 | 4 | 72,605,517 | A | G | 24.9% | −8.53 | 3.3×10−9 | Imputed |
| GC | rs2282680 | 4 | 72,608,364 | C | T | 24.7% | −8.41 | 3.4×10−9 | Imputed |
| GC | rs2282679 | 4 | 72,608,383 | T | G | 24.7% | −8.36 | 3.2×10−9 | Typed |
| GC | rs3755967 | 4 | 72,609,398 | C | T | 24.7% | −8.37 | 3.1×10−9 | Imputed |
| GC | rs2298850 | 4 | 72,614,267 | G | C | 25.1% | −8.58 | 9.8×10−10 | Imputed |
| GC | rs11723621 | 4 | 72,615,362 | A | G | 25.1% | −8.58 | 9.9×10−10 | Imputed |
| GC | rs1352846 | 4 | 72,617,775 | A | G | 24.1% | −8.88 | 6.5×10−10 | Imputed |
| GC | rs4588 | 4 | 72,618,323 | G | T | 25.1% | −8.56 | 1.0×10−9 | Typed |
| Variants reaching genome-wide significant with cord blood vitamin D concentration: | |||||||||
| GC | rs2298850 | 4 | 72,614,267 | G | C | 25.0% | −3.18 | 1.5×10−8 | Imputed |
| GC | rs11723621 | 4 | 72,615,362 | A | G | 25.0% | −3.18 | 1.5×10−8 | Imputed |
| GC | rs1352846 | 4 | 72,617,775 | A | G | 24.6% | −3.22 | 1.5×10−8 | Imputed |
| GC | rs4588 | 4 | 72,618,323 | G | T | 25.0% | −3.22 | 1.0×10−8 | Typed |