TABLE 1.
Study aspects | Nash et al., 2018 | This study | |
Metagenomic soil samples | Number of samples | 70 | 65 |
Studied proglacial systems | Midtre Lovénbreen, Storglaciären, and Rabots glacier forefields; and the proglacial field of the Greenland ice sheet in proximity of point 601 | Midtre Lovénbreen and Storglaciären forefields; and the proglacial field of the Greenland ice sheet in proximity of point 601 (i.e., same samples as collected, and sequenced from Nash et al., 2018) | |
Geochemistry | Analyzed variables | TOC and TN | TOC and TN (data from Nash et al., 2018) |
Bioinformatics | Read assembly | SPADES on each forefield dataset separately | MEGAHIT on all forefield datasets together |
Gene and taxon annotation | BLAST + MEGAN | Diamond + LongMeta | |
Study aims | Taxon and functional association with soil developmental stages | No | Yes |
Functional characterization | nif genes | Functional trends along different developmental soil stages with a focus on genes involved in nitrogen fixation (i.e., nif genes) and rock weathering phenomena (i.e., obcA genes, genes involved in cyanide and siderophore synthesis) | |
Taxon characterization | Diazotrophs present in the different proglacial systems | Taxonomic trends along different developmental soil stages |
TN, total nitrogen; TOC, total organic carbon.