Table 3.
Scores after ZDOCK and RDOCK docking.
| Receptor protein | Ligand protein | Pose no. | ZDOCK scorea | E_RDOCK scorea | Clashb |
|---|---|---|---|---|---|
| HNRPK | AGPS | 1 | 25.32 | -35.77 | 0 |
| 2 | 24.64 | -27.20 | 0 | ||
| 3 | 24.10 | -22.14 | 0 | ||
| 4 | 23.98 | -21.31 | 0 | ||
| 5 | 24.18 | -19.21 | 0 |
aLower values of E_RDOCK and higher ZDOCK score indicate top/better docking of the complex. bClash “0” indicates no stearic clash between the proteins after being refined by the RDOCK protocol.