Table 4.
Prediction of transmembrane helices in proteins using the TMHMM Server v2.0.
Viral component | Position | Amino acids |
---|---|---|
Capsid protein | Inside | 1–99 |
Membrane glycoprotein precursor | Outside | 1–166 |
Envelope protein | Outside | 1–442 |
TMhelix | 443–465 | |
Inside | 466–471 | |
TMhelix | 472–494 | |
Outside | 495–495 | |
Nonstructural protein NS1 | Outside | 1–352 |
Nonstructural protein NS3 | Outside | 1–618 |
Nonstructural protein NS5 | Outside | 1–900 |