Table 2.
Results for the validation of the two genome-wide significant variants in an independent dataset of breast cancer patients with metastatic primary breast cancer at diagnosis.
| SNP | Chr | Position | Ref | Alt | EAF | r2 | HR | LCL | UCL | P value |
|---|---|---|---|---|---|---|---|---|---|---|
| rs138569520 | 1 | 226193175 | T | C | 0.02 | 0.69 | 1.49 | 0.60 | 3.71 | 0.34 |
| rs146023652 | 1 | 226158826 | C | T | 0.02 | 0.79 | 1.25 | 0.46 | 3.37 | 0.66 |
ALT alternate, REF reference, EAF effect allele frequency, HR hazard rate, LCL lower control limit, UCL upper control limit, r2 imputation quality.