Table 1.
Phylum | # Sequences | Genome median GC (%) | arr median GC (%) | min arr median GC (%) | max arr median GC (%) | arr median size (bp) | SD of arr GC |
---|---|---|---|---|---|---|---|
Acidobacteria | 7 | 0.58 | 0.56 | 0.53 | 0.61 | 414 | 0.0336 |
Actinobacteria | 3559 | 0.64 | 0.63 | 0.48 | 0.75 | 426 | 0.0388 |
Bacteroidetes | 401 | 0.38 | 0.43 | 0.35 | 0.64 | 438 | 0.0620 |
Balneolaeota | 1 | 0.48 | 0.38 | 0.38 | 0.38 | 438 | – |
Cyanobacteria | 20 | 0.47 | 0.52 | 0.46 | 0.61 | 417 | 0.0340 |
Deinococcus-Thermus | 2 | 0.65 | 0.55 | 0.5 | 0.61 | 412.5 | 0.0778 |
Firmicutes | 1398 | 0.4 | 0.38 | 0.27 | 0.61 | 417 | 0.0604 |
Proteobacteria | 3668 | 0.57 | 0.47 | 0.32 | 0.74 | 453 | 0.0687 |
Rhodothermaeota | 1 | 0.72 | 0.68 | 0.68 | 0.68 | 417 | - |
Verrucomicrobia | 6 | 0.6 | 0.59 | 0.55 | 0.65 | 417 | 0.0320 |
Plasmids | |||||||
Phylum | # Sequences | Plasmid median GC (%) | arr median GC (%) | min arr median GC (%) | max arr median GC (%) | arr median size (bp) | SD of arr GC |
Actinobacteria | 2 | 0.715 | 0.685 | 0.68 | 0.69 | 417 | 0.0070 |
Bacteroidetes | 2 | 0.32 | 0.38 | 0.38 | 0.38 | 447 | 0 |
Firmicutes | 7 | 0.37 | 0.32 | 0.31 | 0.33 | 417 | 0.00690 |
Proteobacteria | 306 | 0.52 | 0.47 | 0.36 | 0.63 | 453 | 0.0368 |
*SD standard derivation.