Table 1.
Target gene | Purpose | Name | Sequence of oligonucleotide (5’–3’) |
---|---|---|---|
NDV | qRT-PCR | NDV F | TGCAGCAATGGTACTCCGTT |
NDV R | CCTTTGCTACCGTGACCCAT | ||
chIFN-α | qRT-PCR | qIFN-α F | AACCACCCACGACATCCTTC |
qIFN-α R | TGTCGCTGCTGTCCAAGC | ||
chIFN-β | qRT-PCR | qIFN-β F | CCTCAACCAGATCCAGCATT |
qIFN-β R | GGATGAGGCTGTGAGAGGAG | ||
chIFN-λ | qRT-PCR | qIFN-λ F | CCTGGCCTTCCTTACCCAAG |
qIFN-λ R | CTCAGTTTCCCAGAGGGCTG | ||
chIRF-7 | qRT-PCR | qIRF-7 F | GCCTGAAGAAGTGCAAGGTC |
qIRF-7 R | CTCTGTGCAAAACACCCTGA | ||
chPKR | qRT-PCR | qPKR F | TGCTTGACTGGAAAGGCTACT |
qPKR R | TCAGTCAAGAATAAACCATGTGTG | ||
chMx-1 | qRT-PCR | qMx-1 F | GTTTCGGACATGGGGAGTAA |
qMx-1 R | GCATACGATTTCTTCAACTTTGG | ||
IL-6 | qRT-PCR | qIL-6 F | GACGAGGAGAAATGCCTGAC |
qIL-6 R | GACTTCAGATTGGCGAGGAG | ||
IL-8 | qRT-PCR | qIL-8 F | GCTCTGTCGCAAGGTAGGAC |
qIL-8 R | GGCCATAAGTGCCTTTACGA | ||
chβ-actin | qRT-PCR | qβ-actin F | CAGACATCAGGGTGTGATGG |
qβ-actin R | TCAGGGGCTACTCTCAGCTC | ||
chDDX1 | qRT-PCR | qDDX1 F | CGACAAACTCTGGGAAAGGC |
qDDX1 R | TTGTGTTCCTTGATTGCCCG | ||
To obtain sequence | chDDX1 F | ATGGCGGCGTTCTCGGAAAT | |
chDDX1 R | TCAGAATGTTCTGAACAGCT | ||
Construction of chDDX1 | p3×FLAG-14-CMV Kpn I F | gatagatctgatatcggtaccATGGCGGCGTTCTCGGAA | |
p3×FLAG-14-CMV BamH I R | tttgtagtcagcccgggatccGAATGTTCTGAACAGCTGGTTAGG | ||
Construct truncated forms of chDDX1 | d SPRY U | AGTCACACCTCTAGTTGC | |
d SPRY L | caactagaggtgtgactTTCAAATTTCCACCAAAAGATGG | ||
d HELICc U | ACAATCTATTTTTGTCCTGCAG | ||
d HELICc L | gacaaaaatagattgtAGGATGGGTCTGGCAATTTC | ||
d 1-100 aa U | GGTACCGATATCAGATCTATC | ||
d 1-100 aa L | gatatcggtaccatgGCTTTTGCAATTGGATC | ||
d 1-250 aa U | GGTACCGATATCAGATCTATC | ||
d 1-250 aa L | gatatcggtaccatgCCAAAAGATGGCTATATTGG | ||
d 1-500 aa U | GGTACCGATATCAGATCTATC | ||
d 1-500 aa L | gatatcggtaccatgATCAAGGAACACAAGATGG | ||
d 251-500 aa U | TGGAAATTTGAAGTCTTCTTCAC | ||
d 251-500 aa L | gaagacttcaaatttccaATCAAGGAACACAAGATG | ||
d 501-740 aa U | TGCCCGAACAGTGTACTC | ||
d 501-740 aa L | tacactgttcgggcaGGATCCCGGGCTGACTACAAAG |