TABLE 1.
Barcode resolution based on BLAST searches, using the generated DNA barcode library as both query and local database
Marker | IS a | NIS b | NA c | %IS d | %SS e |
---|---|---|---|---|---|
rbcL | 253 | 51 | 39 | 83.22 | 88.63 |
rbcL_reduced f | 215 | 40 | ‐ | 84.31 | 74.34 |
ITS2 | 265 | 21 | 57 | 92.66 | 83.38 |
ITS2_reduced f | 234 | 21 | ‐ | 91.76 | 74.34 |
rbcL + ITS2 | 310 | 25 | 8 | 92.54 | 97.67 |
rbcL + ITS2_reduced f | 241 | 14 | ‐ | 94.51 | 74.34 |
matK | 118 | 8 | 217 | 93.65 | 36.73 |
rpoB | 113 | 6 | 224 | 94.96 | 34.69 |
rpoC1 | 114 | 12 | 217 | 90.48 | 36.73 |
atpF‐atpH | 119 | 8 | 216 | 93.70 | 37.03 |
psbK‐psbI | 88 | 7 | 248 | 92.63 | 27.70 |
trnH‐psbA | 75 | 2 | 266 | 97.40 | 22.45 |
IS, number of correctly identified species.
NIS, number of nonidentified species.
NA number of species with no available sequences.
%IS, percentage of correctly identified species.
%SS, percentage of species with available sequences.
Including only the species with sequences of both rbcL and ITS2.