Table 2.
Genes downregulated at mid-tail regression in comparison to the beginning
| KyotoGrail KH gene model | Expression ratio | Identity and/or GO function | References in ascidians/reported functions in animals |
|---|---|---|---|
| KH.C14.261 | 0,023 | putative lysozyme-like protein; PE-PGRS family protein | x |
| KH.L37.67 | 0,025 | TGM1, Transglutaminase | x |
| KH.C7.501 | 0,026 | ferritin | x |
| KH.C1.459 | 0,026 | Sorting nexin-18 | x |
| KH.C4.177 | 0,028 | Glucocorticoid receptor-like, Pinch protein | x |
| KH.C7.314 | 0,050 | mediator of RNA polymerase 2 transcription subunit 30 (med30) |
Chambon et al. 2007 (ci0100134193) apoptosis |
| KH.C14.281 | 0,050 | glycerol-3-phosphate (1)-acyltransferase | x |
| KH.L142.4 | 0,056 | universal stress protein YxiE | x |
| KH.C1.263 | 0,061 | ribosomal protein L4 | x |
| KH.C10.335 | 0,061 | calmodulin like protein | migration |
| KH.C11.384 | 0,092 | uncharacterized protein LOC100186758 | x |
| KH.L112.30 | 0,103 | transmembrane matrix receptor MUP-4-like | x |
| KH.C1.1024 | 0,129 | glutamate-rich WD repeat-containing protein 1 | x |
| KH.C4.94 | 0,129 | lipopolysaccharide-induced tumor necrosis factor-alpha factor | x |
| KH.L92.1 | 0,144 | protein DDB_G0283697 | x |
| KH.C2.124 | 0,155 | Glycerol-3-phosphate (1)-acyltransferase | x |
| KH.L108.23 | 0,167 | protein DD3–3 | x |
| KH.C11.93 | 0,174 | N-acetyltransferase 6 | x |
| KH.C10.133 | 0,194 | holine-phosphate cytidylyltransferase A-like | x |
| KH.C3.231 | 0,216 | uncharacterized protein LOC100184171 | x |
| KH.L59.3 | 0,227 | uncharacterized protein LOC100175851 | x |
| KH.C4.450 | 0,235 | sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 | x |
| KH.C11.274 | 0,243 | P-selectin-like |
Chambon et al. 2007 (ci0100139289) apoptosis |
| KH.C4.73 | 0,268 | uncharacterized protein LOC100175287 | x |
| KH.C14.356 | 0,275 | putative lysozyme-like protein | x |
| KH.C11.287 | 0,278 | unc-93 homolog A-like | x |
| KH.C14.337 | 0,313 | lysozyme-like protein; PE-PGRS family protein PE_PGRS30 | x |
| KH.C14.549 | 0,335 | lysozyme-like protein; PE-PGRS family protein PE_PGRS30 | x |
| KH.L108.30 | 0,344 | uromodulin-like 1 precursor | migration |
| KH.C12.655 | 0,390 | uncharacterized protein LOC113474772 | x |
| KH.L132.16 | 0,428 | fibrillin-3; MATN2 | migration |
| KH.L132.4 | 0,428 | matrilin-2; MEGF6 |
Chambon et al. 2007 (ci0100138016) migation |
| KH.C2.613 | 0,443 | zinc transporter 9-like | x |
| KH.C11.454 | 0,446 | uncharacterized protein LOC100184022 | x |
| KH.C8.121 | 0,463 | SCO-spondin | x |
| KH.C4.402 | 0,470 | galanin receptor type 3 | x |