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Tools for data manipulation
| Tool | Version | Author | URL |
|---|---|---|---|
| STAR RNAseq aligner | 2.5.2 | Dobin et al. (2013) | https://github.com/alexdobin/STAR |
| Subread/feature counts | 1.5.1 | Liao et al. (2014) | http://subread.sourceforge.net/ |
| HTSeq | 0.11.2 | Anders et al. (2014) | https://github.com/simon-anders/htseq |
| R | 3.6.0 | R Core Team | https://www.R-project.org/ |
| Seurat | 3.0.0 | Butler et al. (2018) | https://github.com/satijalab |
