Table 2.
Candidates for pathogenicity-related genes and gene clusters
| Features | Number |
|---|---|
| Effector candidatesa | 242 |
| SM gene clustersb | 55 |
| Polyketide | 15 |
| Nonribosomal peptide | 22 |
| Terpene | 6 |
| Beta-lactone | 1 |
| Siderophore | 2 |
| Fungal-RiPP | 1 |
| Others | 8 |
| CAZymesc | 399 |
|
GH |
220 |
| GT | 86 |
| CBM | 10 |
| AA | 66 |
| CE | 19 |
| PL | 7 |
a
Genes encoding effector candidates predicted by EffectorP.
b
Numbers of SM gene clusters for each metabolite type predicted by antiSMASH. Fungal-RiPP, fungal ribosomally synthesized and post-translationally modified peptide.
c
Genes encoding carbohydrate-activate enzymes (CAZymes) predicted by dbCAN. Some genes were annotated with more than one category. GH, glycoside hydrolase; GT, glycosyltransferase; CBM, carbohydrate-binding module; AA, auxiliary activity; CE, carbohydrate esterase; and, PL, polysaccharide lyase