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. 2020 Dec 30;15(8):1253–1263. doi: 10.1093/ecco-jcc/jjaa263

Table 6.

Overview of GRS-MAP associations.

GRS MAP test No. SNPs in optimal GRS R2 Coefficient; SE Empirical p-valuea
CD IgA—MAP0210c 23 117 0.79% -144; 84 0.52
IgA—MAP2609 69 507 1.10% -258; 112 0.20
IgM—MAP0210c 343 804 0.46% -427; 276 0.66
IgM—MAP2609 317 0.60% -10; 6 0.56
UC IgA—MAP0210c 34 068 1.09% 248; 122 0.38
IgA—MAP2609 4 551 0.46% 42; 28 0.80
IgM—MAP0210c 3 638 1.14% -57; 23 0.23
IgM—MAP2609 2 788 0.52% -51; 33 0.68

SNP, single nucleotide polymorphism; GRS, genetic risk score; SE, standard error; CD, Crohn’s disease; UC, ulcerative colitis.

aEmpirical p-value refers to p-value after 10 000 rounds of permutation.