Table 1.

A compendium of pre-built Symphony reference atlases.

	Name	Description	Zenodo Link	Data source
1	10x PBMCs Atlas	Healthy human PBMCs ($n$ = 20,571) sequenced using three 10x protocols (3’v1, 3’v2, 5’)	Link [https://zenodo.org/record/5090425]	10x Genomics
2	Pancreatic Islet Cells Atlas	Pancreatic islet cells ($n$ = 5887) from 32 human donors; from 4 separate studies	Link [https://zenodo.org/record/5090425]	Segerstolpe et al.42; Lawlor et al.43; Grun et al.44; Muraro et al.45
3	Fetal Liver Hematopoiesis Atlas	Human fetal liver cells ($n$ = 113,063) from 14 donors, sequenced with 10x (3’)	Link [https://zenodo.org/record/5090425]	Popescu et al.47
4	Healthy Fetal Kidney Atlas	Human fetal kidney cells ($n$= 27,203) from 6 samples	Link [https://zenodo.org/record/5090425]	Stewart et al.48
5	Memory T Cell (CITE-seq) Atlas	Human memory T cells ($n$ = 500,089) from a tuberculosis cohort (259 donors) assayed with CITE-seq	Link [https://zenodo.org/record/5090425]	Nathan et al.40
6	Cross-tissue Fibroblast Atlas	Human fibroblasts ($n$ = 79,148) from 74 samples spanning 4 inflammatory tissues and corresponding controls	Link [https://sandbox.zenodo.org/record/772596#.YOdFIhNKjlw]	Korsunsky et al.25
7	Cross-tissue Inflammatory Immune Atlas	Immune cells ($n$ = 307,084) from 125 healthy or disease-affected donors across 6 inflammatory diseases	Link [https://zenodo.org/record/5090425]	Zhang et al.26
8	Tabula Muris Senis (FACS) Atlas	Mouse cells from 23 tissues and organs ($n$ = 110,824 cells) across the lifespan.	Link [https://zenodo.org/record/5090425]	The Tabula Muris Consortium62