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. Author manuscript; available in PMC: 2021 Oct 8.
Published in final edited form as: Cell Rep. 2021 Sep 14;36(11):109701. doi: 10.1016/j.celrep.2021.109701

KEY RESOURCES TABLE

REAGENT or RESOURCE SOURCE IDENTIFIER
Bacterial and virus strains
One Shot Stbl3 E. Coli ThermoFisher Scientific Cat#C7373
Library Efficiency DH5α Competent Cells ThermoFisher Scientific Cat#18263012
Biological samples
Healthy human plasma Thalacker-Mercer Lab; Gheller et al., 2021 N/A
Chemicals, peptides, and recombinant proteins
[U-13C6] Glucose Cambridge Isotope Labs Cat#CLM-1396
[U-13C5] Glutamine Cambridge Isotope Labs Cat#CLM-1822
[2,4-13C2] Citrate Cambridge Isotope Labs Cat#CLM-148
[1,5-14C2] Citrate Morovak Inc. N/A
Zinc Chloride Sigma-Aldrich CAS# 7646-85-7
Sodium Citrate Sigma-Aldrich CAS# 6132-04-3
Methoxylamine Hydrochloride MP Biomedicals Cat#02155405
MTBSTFA + 1% TBDMSCl Regis Technologies Cat#1-270143-200
BsmBI New England Biolabs Cat#R0580L
Critical commercial assays
Lipofectamine 3000 ThermoFisher Scientific Cat#L3000008
KAPA HiFi HotStart Ready Mix Kapa Biosystems Cat#KK2602
iTaq Universal SYBR Green Biorad Cat#1725121
iScript Reverse Transcription Supermix Biorad Cat#1708840
RNeasy Mini Kit QIAGEN Cat#74104
Zero Blunt TOPO PCR Cloning Kit ThermoFisher Scientific Cat#450245
prepGEM gold buffer Zygem N/A
Experimental models: Cell lines
HepG2 ATCC Cat#HB-8065
Huh7 Provided by M. Hermann, MIT, Cambridge, MA, USA N/A
A549 ATCC Cat#CCL-185
143B ATCC Cat#CRL-8303
MCF7 ATCC Cat#HTB-22
HEK293FT ThermoFisher Scientific Cat#R70007
Primary rat cortical neurons This paper N/A
Primary rat astrocytes This paper N/A
Oligonucleotides
See Table S1 N/A N/A
Recombinant DNA
LentiCRISPR v2 plasmid Addgene Cat#52961
pCMVR8.2 Addgene Cat#12263
pMD2.G Addgene Cat#12259
Software and algorithms
MATLAB 2014b and 2016b MathWorks https://www.mathworks.com/products/matlab.html
Escher-Trace Kumar et al., 2020 https://escher-trace.github.io/
GraphPad Prism 7.00 GraphPad https://www.graphpad.com/scientific-software/prism/
INCA 1.5 Young, 2014 https://mfa.vueinnovations.com/
CRISPOR Concordet and Haeussler, 2018 http://crispor.tefor.net/
NCBI BLAST Agarwala et al., 2018 https://blast.ncbi.nlm.nih.gov/Blast.cgi