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. 2021 Sep 25;24(10):103168. doi: 10.1016/j.isci.2021.103168
REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies

Integrin β1 (D2E5) Cell Signaling Technology Cat#9699; RRID:AB_11178800
Integrin β1 (12G10) Abcam Catab30394
Integrin β1 (CD29)-BV510 BD Biosciences Cat#747747; RRID:AB_2868388
Integrin α1 (CD49a) Alexa 647 Biolegend Cat328310; RRID:AB_2129242
Integrin α2 Abcam Catab181548; RRID:AB_2847852
Integrin α2 (CD49b)-FITC BD Biosciences Cat555498; RRID:AB_395888
Integrin α2 (CD49b)-Alexa 647 BD Biosciences Cat564314; RRID:AB_2738739
E-Cadherin (24E10) Cell Signaling Technology Cat3195; RRID:AB_2291471
K48-linkage Specific Polyubiquitin (D9D5) Cell Signaling Technology Cat4289; RRID:AB_10557239
HA-Tag Cell Signaling Technology Cat3724; RRID:AB_1549585
AnnexinV-FITC Biolegend 640906
Tubulin Cell Signaling Technology Cat2148; RRID:AB_2288042
GAPDH Santa Cruz Catsc47724; RRID:AB_627678
PARP Cell Signaling Technology Cat9542; RRID:AB_2160739
Cleaved PARP Cell Signaling Technology Cat9541; RRID:AB_331426
ATF-6 Cell Signaling Technology Cat65880; RRID:AB_2799696
IRE1α Cell Signaling Technology Cat3294; RRID:AB_823545
Actin Sigma-Aldrich CatA5441; RRID:AB_476744
SignalStain®Boost IHC Detection Reagent (HRP, Mouse) Cell Signaling Technology Cat8125; RRID:AB_10547893
SignalStain®Boost IHC Detection Reagent (HRP, Rabbit) Cell Signaling Technology Cat8114; RRID:AB_10544930
Anti-mouse IgG, HRP-linked Antibody Cell Signaling Technology Cat7076; RRID:AB_330924
Anti-rabbit IgG, HRP-linked Antibody Cell Signaling Technology Cat7074; RRID:AB_2099233
Sambucus Nigra Lectin (Agarose bound) Vector Laboratories AL-1303-2

Chemicals, peptides, and recombinant proteins

Collagen type I (from Human placenta) Sigma-Aldrich C7774
Collagen type III (From human placenta) Advanced BioMatrix 5019
Collagen type IV (From Human Cell) Sigma-Aldrich C7521
Fibronectin from Human Plasma Millipore FC010
Laminin (From EHS murine sarcoma) Sigma-Aldrich L2020
DAPI BD Biosciences 564907
FITC Annexin V Apoptosis Detection Kit I BD Biosciences 556547
Pierce™ BCA Protein Assay Kit ThermoFisher Scientific 23225
Diaminobenzidine substrate kit (DAB) ThermoFisher Scientific 34002
ProLong® Gold antifade reagent Cell Signaling Technology 9071
Radioimmunoprecipitation assay buffer (RIPA) Cell Signaling Technology 9806
Thiazolyl Blue Tetrazolium Bromide (MTT) Sigma-Aldrich M2128
Agarose, low gelling temperature Sigma-Aldrich A9414
Fetal Bovine Serum Sigma-Aldrich F7524
Bovine serum albumin Sigma-Aldrich A9418
Proteinase Inhibitor Cocktails Sigma-Aldrich P8340
Cell-dissociation solution non-enzymatic Sigma-Aldrich C5914
MG132 Sigma-Aldrich M8699
Cycloheximide Sigma-Aldrich C4859
Tunicamycin Sigma-Aldrich T7765
pGEM®-T Easy Vector System Promega A1360
Wizard® SV Gel and PCR Clean-Up System Promega A9281
Pfu DNA Polymerase Promega M7741
Sequencing-grade modified trypsin Promega V5111
jetPEI DNA transfection reagent Polyplus-transfection 101-10N
Trans IT-X2 transfection reagent Mirus MIR6004
Q5 Site-Directed Mutagenesis Kit New England Biolabs E0554S
PNGase F New England Biolabs P0708L

Experimental models: Cell lines

IGROV1 ATCC RRID:CVCL_1304
SK-OV-3 ATCC RRID:CVCL_0532
OVCAR3 ATCC RRID:CVCL_0465
OVCAR4 Oncotest GmbH RRID:CVCL_1627
OVCAR5 Oncotest GmbH RRID:CVCL_1628
OVCAR8 Oncotest GmbH RRID:CVCL_1629
CAOV3 ATCC RRID:CVCL_0201
BG1 Oncotest GmbH RRID:CVCL_6571
SKOV3.ip1 RRID:CVCL_0C84

Oligonucleotides

ITGA2 N105Q For AAGCATTCCAcaaGTTACTGAGATG This paper NA
ITGA2 N105Q Rev GTTGAAGTTTGCAAATTTAGTTTTTC This paper NA
ITGA2 N112Q For GATGAAAACCcaaATGAGCCTCG This paper NA
ITGA2 N112Q Rev
TCAGTAACATTTGGAATGC
This paper NA
ITGA2 N343Q For ATACTTTTTCcaaGTGTCTGATGAAGC This paper NA
ITGA2 N343Q Rev
CTTTCTGTTGGAATACTAGC
This paper NA
ITGA2 N432Q For GCAGGACAGAcaaCACAGTTCATATTTAG This paper NA
ITGA2 N432Q Rev
AGAATTTGGTCAAAGGCTTG
This paper NA
ITGA2 N460Q For TCCTCGGGCAcaaTATACCGGCC This paper NA
ITGA2 N460Q Rev
GCACCAGCAACAAAGTGAG
This paper NA
ITGA2 N475Q For TGAGAATGGCcagATCACGGTTATTC This paper NA
ITGA2 N475Q Rev
TTCACACTATATAGCACTATCTGG
This paper NA
ITGA2 N699Q For CATTGTATATcaaATCACACTTGATGC This paper NA
ITGA2 N699Q Rev
GCCACTTGATTGTTTTGC
This paper NA
ITGA2 N1057Q For TTCCTGTAGTcaaGTTACCTGCTG This paper NA
ITGA2 N1057Q Rev
GCAGTTCTGCAGTTCAATTC
This paper NA
ITGA2 N1074Q For ATACTTTGTTcaaGTGACTACCAGAATTTG This paper NA
ITGa2 N1074Q Rev
TCTCCTTTCATGTGAACG
This paper NA
ITGA2 N1081Q For CAGAATTTGGcaaGGGACTTTCG This paper NA
ITGA2 N1081Q Rev
GTAGTCACTTGAACAAAGTATTC
This paper NA
ITGA2 614F Sequencing primer GCCCCACAAAGACACAGGT This paper NA
ITGA2 1990F Sequencing primer
ACCGATGTGTCTATTGGTGCC
This paper NA
ITGA2 2003R Sequencing Primer TGGTCAACAAGAATGCTCAGA This paper NA
ATF-6 For QPCR TTGACATTTTTGGTCTTGTGG Balakrishnan et al., 2013 NA
ATF-6 Rev
GCAGAAGGGGAGACACATTT
Balakrishnan et al., 2013 NA
PERK For TCATCCAGCCTTAGCAAACC Balakrishnan et al., 2013 NA
PERK Rev
ATGCTTTCACGGTCTTGGTC
Balakrishnan et al., 2013 NA
IRE1a For CTCTGTCCGTACCGCCC Balakrishnan et al., 2013 NA
IRE1a Rev
GAAGCGTCACTGTGCTGGT
Balakrishnan et al., 2013 NA

Recombinant DNA

pUltra Addgene 24129
pUltra-Chili Addgene 48687
pCMVR8.74 Addgene 22036
pMD2.G Addgene 12259
mCherry-Integrin-Alpha2-N-18 Addgene 55063
pUltra-Chili-ITGA2-HA Huang et al., 2020 NA
pUltra-Chili-ITGA2-HA (KOR) Huang et al., 2020 NA
pUltra-Chili-ITGA2-N3NQ-HA This paper NA
pUltra-Chili-ITGA2-I4NQ-HA This paper NA
pUltra-Chili-ITGA2-C3NQ-HA This paper NA
pUltra-Chili-ITGA2-10NQ-HA This paper NA
pCMV3-ST6GAL1-HA Sino Biological Inc HG11590-CY
pUltra-ST6GAL1 This paper NA

Software and algorithms

R studio 4.0.3 R Core Team, 2017 https://www.R-project.org/
GraphPad Prism 9 Pad Software, Inc. https://www.graphpad.com/
ImageJ NIH https://imagej.nih.gov/ij/
FlowJo v10 Becton Dickinson https://www.flowjo.com/
Byonic 2.16 Protein Metrics https://proteinmetrics.com/
Image Lab 6.0.1 Bio-Rad https://www.bio-rad.com/
Skyline 20.1 MacCoss Lab https://skyline.ms/
SafeQuant v2.3.4 Ahrne et al., 2016 https://github.com/eahrne/SafeQuant/)
ReactomePA Yu and He, 2016 NA
Progenesis QI 2.0 Waters https://www.nonlinear.com/
OMERO v5.6 OME project https://www.openmicroscopy.org/omero
Adobe illustrator 2021 Adobe https://www.adobe.com/ch_de/?mv=search&sdid=88X75SKX